up_system_libsvm_no_svmhdepends -- do not use shipped svm.h

debian/changelog

@@ -3,6 +3,9 @@ scikit-learn (0.5~rc3-1) experimental; urgency=low
   * New upstream release-candidate
     - pruning joblib in favor of external package
       added patch deb_use_system_joblib 
+  * New patches for upstream
+    - up_libsvm_verbosity_control -- API for controlling libsvm verbosity
+    - up_system_libsvm_no_svmhdepends -- do not use shipped svm.h
   * Deprecated patches:
     - up_workaround_numpy_cython_issue589652
     - deb_cython_0.12.1

debian/patches/series

+up_system_libsvm_no_svmhdepends
+up_libsvm_verbosity_control
 deb_use_system_joblib
 deb_use_system_libraries
-up_libsvm_verbosity_control
 deb_libsvm_cythoning

debian/patches/up_system_libsvm_no_svmhdepends

+--- a/scikits/learn/svm/setup.py
++++ b/scikits/learn/svm/setup.py
+@@ -22,6 +22,7 @@ def configuration(parent_package='', top
+     libsvm_libraries = []
+     libsvm_library_dirs = []
+     libsvm_sources = [join('src', 'libsvm', '_libsvm.c')]
++    libsvm_depends = [join('src', 'libsvm', 'libsvm_helper.c')]
+ 
+     # we try to link against system-wide libsvm
+     if site_cfg.has_section('libsvm'):
+@@ -31,15 +32,15 @@ def configuration(parent_package='', top
+     else:
+         # if not specified, we build our own libsvm
+         libsvm_sources.append(join('src', 'libsvm', 'svm.cpp'))
++        libsvm_depends.append(join('src', 'libsvm', 'svm.h'))
+ 
+     config.add_extension('_libsvm',
+                          sources=libsvm_sources,
+                          include_dirs=libsvm_includes,
+                          libraries=libsvm_libraries,
+                          library_dirs=libsvm_library_dirs,
+-                         depends=[join('src', 'libsvm', 'svm.h'),
+-                                  join('src', 'libsvm', 'libsvm_helper.c')],
+-                                  )
++                         depends=libsvm_depends,
++                         )
+ 
+ 
+     ### liblinear module