From 2704a3f2bd878eaffdc19d1f12f3a93c57f4bc41 Mon Sep 17 00:00:00 2001 From: Fabian Pedregosa <fabian.pedregosa@inria.fr> Date: Thu, 18 Mar 2010 13:10:39 +0000 Subject: [PATCH] Fix memory leaks in the svm bindings. It's sometimes hard to know if a particular object is being freed by libsvm or if it's up to us to free them. From: Fabian Pedregosa <fabian.pedregosa@inria.fr> git-svn-id: https://scikit-learn.svn.sourceforge.net/svnroot/scikit-learn/trunk@566 22fbfee3-77ab-4535-9bad-27d1bd3bc7d8 --- scikits/learn/src/libsvm.c | 661 +++++++++++++++--------------- scikits/learn/src/libsvm.pyx | 2 + scikits/learn/src/libsvm_helper.c | 12 +- 3 files changed, 347 insertions(+), 328 deletions(-) diff --git a/scikits/learn/src/libsvm.c b/scikits/learn/src/libsvm.c index 74f94f9817..d549239063 100644 --- a/scikits/learn/src/libsvm.c +++ b/scikits/learn/src/libsvm.c @@ -1,4 +1,4 @@ -/* Generated by Cython 0.12 on Tue Mar 16 11:34:54 2010 */ +/* Generated by Cython 0.12 on Thu Mar 18 13:55:06 2010 */ #define PY_SSIZE_T_CLEAN #include "Python.h" @@ -716,9 +716,9 @@ static char __pyx_k_8[] = "unknown dtype code in numpy.pxd (%d)"; static char __pyx_k_9[] = "Format string allocated too short, see comment in numpy.pxd"; static char __pyx_k_10[] = "Format string allocated too short."; static char __pyx_k_11[] = "\nBinding for libsvm[1]\n---------------------\nWe do not use the binding that ships with libsvm because we need to\naccess svm_model.sv_coeff (and other fields), but libsvm does not\nprovide an accessor. Our solution is to export svm_model and access it\nmanually, this is done un function see svm_train_wrap.\n\nlibsvm uses an sparse representation for the training vectors. In\nmethod dense_to_sparse we translate a dense matrix representation as\nthose produced by NumPy to a sparse representation that libsvm can\nunderstand.\n\nWe define arrays to be the same type as those in libsvm, usually of \ntype C double and C int.\n\nLow-level memory management is done in libsvm_helper.c. If we happen\nto run out of memory a MemoryError will be raised. In practice this is\nnot very helpful since hight changes are malloc fails inside svm.cpp,\nwhere no sort of memory checks are done.\n\nThese are low-level routines, not meant to be used directly. See\nscikits.learn.svm for a higher-level API.\n\n[1] http://www.csie.ntu.edu.tw/~cjlin/libsvm/\n\nNotes\n-----\nMaybe we could speed it a bit further by decorating functions with\n@cython.boundscheck(False), but probably it is not worth since all\nwork is done in lisvm_helper.c\nAlso, the signature mode='c' is somewhat superficial, since we already\ncheck that arrays are C-contiguous in svm.py\n\nAuthors\n-------\n2010: Fabian Pedregosa <fabian.pedregosa@inria.fr>\n Gael Varoquaux <gael.varoquaux@normalesup.org>\n"; -static char __pyx_k_12[] = "predict_wrap (line 83)"; -static char __pyx_k_13[] = "train_wrap (line 167)"; -static char __pyx_k_14[] = "predict_from_model_wrap (line 262)"; +static char __pyx_k_12[] = "predict_wrap (line 84)"; +static char __pyx_k_13[] = "train_wrap (line 168)"; +static char __pyx_k_14[] = "predict_from_model_wrap (line 263)"; static char __pyx_k_15[] = "predict_from_model_wrap"; static char __pyx_k__B[] = "B"; static char __pyx_k__C[] = "C"; @@ -861,7 +861,7 @@ static PyObject *__pyx_n_s__weight_label; static PyObject *__pyx_n_s__zeros; static PyObject *__pyx_int_15; -/* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":83 +/* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":84 * * * def predict_wrap( np.ndarray[np.double_t, ndim=2, mode='c'] X, # <<<<<<<<<<<<<< @@ -932,7 +932,7 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ PyObject *__pyx_t_12 = NULL; static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__X,&__pyx_n_s__Y,&__pyx_n_s__T,&__pyx_n_s__svm_type,&__pyx_n_s__kernel_type,&__pyx_n_s__degree,&__pyx_n_s__gamma,&__pyx_n_s__coef0,&__pyx_n_s__eps,&__pyx_n_s__C,&__pyx_n_s__nr_weight,&__pyx_n_s__weight_label,&__pyx_n_s__weight,&__pyx_n_s__nu,&__pyx_n_s__cache_size,&__pyx_n_s__p,&__pyx_n_s__shrinking,&__pyx_n_s__probability,0}; __Pyx_RefNannySetupContext("predict_wrap"); - __Pyx_TraceCall("predict_wrap", __pyx_f[0], 83); + __Pyx_TraceCall("predict_wrap", __pyx_f[0], 84); __pyx_self = __pyx_self; if (unlikely(__pyx_kwds)) { Py_ssize_t kw_args = PyDict_Size(__pyx_kwds); @@ -968,151 +968,151 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__Y); if (likely(values[1])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 2: values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__T); if (likely(values[2])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 3: values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__svm_type); if (likely(values[3])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 4: values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__kernel_type); if (likely(values[4])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 5: values[5] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__degree); if (likely(values[5])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 6: values[6] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__gamma); if (likely(values[6])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 6); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 6); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 7: values[7] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__coef0); if (likely(values[7])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 7); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 7); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 8: values[8] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__eps); if (likely(values[8])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 8); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 8); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 9: values[9] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__C); if (likely(values[9])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 9); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 9); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 10: values[10] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__nr_weight); if (likely(values[10])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 10); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 10); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 11: values[11] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__weight_label); if (likely(values[11])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 11); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 11); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 12: values[12] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__weight); if (likely(values[12])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 12); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 12); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 13: values[13] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__nu); if (likely(values[13])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 13); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 13); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 14: values[14] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__cache_size); if (likely(values[14])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 14); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 14); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 15: values[15] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__p); if (likely(values[15])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 15); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 15); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 16: values[16] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__shrinking); if (likely(values[16])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 16); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 16); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 17: values[17] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__probability); if (likely(values[17])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 17); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, 17); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, PyTuple_GET_SIZE(__pyx_args), "predict_wrap") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, PyTuple_GET_SIZE(__pyx_args), "predict_wrap") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } __pyx_v_X = ((PyArrayObject *)values[0]); __pyx_v_Y = ((PyArrayObject *)values[1]); __pyx_v_T = ((PyArrayObject *)values[2]); - __pyx_v_svm_type = __Pyx_PyInt_AsInt(values[3]); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 86; __pyx_clineno = __LINE__; 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if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 87; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_nr_weight = __Pyx_PyInt_AsInt(values[10]); if (unlikely((__pyx_v_nr_weight == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 87; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_svm_type = __Pyx_PyInt_AsInt(values[3]); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 87; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_kernel_type = __Pyx_PyInt_AsInt(values[4]); if (unlikely((__pyx_v_kernel_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 87; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_degree = __Pyx_PyInt_AsInt(values[5]); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 87; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_gamma = __pyx_PyFloat_AsDouble(values[6]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 87; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_coef0 = __pyx_PyFloat_AsDouble(values[7]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 88; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_eps = __pyx_PyFloat_AsDouble(values[8]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 88; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_C = __pyx_PyFloat_AsDouble(values[9]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 88; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nr_weight = __Pyx_PyInt_AsInt(values[10]); if (unlikely((__pyx_v_nr_weight == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 88; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_v_weight_label = ((PyArrayObject *)values[11]); __pyx_v_weight = ((PyArrayObject *)values[12]); - __pyx_v_nu = __pyx_PyFloat_AsDouble(values[13]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_cache_size = __pyx_PyFloat_AsDouble(values[14]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_p = __pyx_PyFloat_AsDouble(values[15]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_shrinking = __Pyx_PyInt_AsInt(values[16]); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_probability = __Pyx_PyInt_AsInt(values[17]); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 91; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nu = __pyx_PyFloat_AsDouble(values[13]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; 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__pyx_v_Y = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 1)); __pyx_v_T = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 2)); - __pyx_v_svm_type = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 3)); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_kernel_type = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 4)); if (unlikely((__pyx_v_kernel_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_degree = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 5)); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_gamma = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 6)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 86; __pyx_clineno = __LINE__; 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if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 88; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_C = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 9)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 88; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nr_weight = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 10)); if (unlikely((__pyx_v_nr_weight == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 88; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_v_weight_label = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 11)); __pyx_v_weight = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 12)); - __pyx_v_nu = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 13)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_cache_size = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 14)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; 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if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 91; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_p = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 15)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 91; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_shrinking = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 16)); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 91; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_probability = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 17)); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_wrap", 1, 18, 18, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("libsvm.predict_wrap"); return NULL; @@ -1129,43 +1129,43 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ __pyx_bstruct_T.buf = NULL; __pyx_bstruct_weight_label.buf = NULL; __pyx_bstruct_weight.buf = NULL; - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_X), __pyx_ptype_5numpy_ndarray, 1, "X", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_Y), __pyx_ptype_5numpy_ndarray, 1, "Y", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_T), __pyx_ptype_5numpy_ndarray, 1, "T", 0))) {__pyx_filename = __pyx_f[0]; 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__pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_weight_label), __pyx_ptype_5numpy_ndarray, 1, "weight_label", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 89; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_weight), __pyx_ptype_5numpy_ndarray, 1, "weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_X, (PyObject*)__pyx_v_X, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_X, (PyObject*)__pyx_v_X, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; 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- if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_T, (PyObject*)__pyx_v_T, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_T, (PyObject*)__pyx_v_T, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_T = __pyx_bstruct_T.strides[0]; __pyx_bstride_1_T = __pyx_bstruct_T.strides[1]; __pyx_bshape_0_T = __pyx_bstruct_T.shape[0]; __pyx_bshape_1_T = __pyx_bstruct_T.shape[1]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight_label, (PyObject*)__pyx_v_weight_label, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight_label, (PyObject*)__pyx_v_weight_label, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_weight_label = __pyx_bstruct_weight_label.strides[0]; __pyx_bshape_0_weight_label = __pyx_bstruct_weight_label.shape[0]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight, (PyObject*)__pyx_v_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 83; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight, (PyObject*)__pyx_v_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 84; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_weight = __pyx_bstruct_weight.strides[0]; __pyx_bshape_0_weight = __pyx_bstruct_weight.shape[0]; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":129 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":130 * * # set libsvm problem * problem = set_problem(X.data, Y.data, X.shape) # <<<<<<<<<<<<<< @@ -1174,7 +1174,7 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ */ __pyx_v_problem = set_problem(__pyx_v_X->data, __pyx_v_Y->data, __pyx_v_X->dimensions); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":132 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":133 * * # set parameters * if (gamma == 0): gamma = 1.0/X.shape[0] # <<<<<<<<<<<<<< @@ -1186,14 +1186,14 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ __pyx_t_2 = (__pyx_v_X->dimensions[0]); if (unlikely(__pyx_t_2 == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "float division"); - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 132; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[0]; __pyx_lineno = 133; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_v_gamma = (1.0 / __pyx_t_2); goto __pyx_L6; } __pyx_L6:; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":136 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":137 * cache_size, C, eps, p, shrinking, * probability, nr_weight, weight_label.data, * weight.data) # <<<<<<<<<<<<<< @@ -1202,7 +1202,7 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ */ __pyx_v_param = set_parameter(__pyx_v_svm_type, __pyx_v_kernel_type, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_nu, __pyx_v_cache_size, __pyx_v_C, __pyx_v_eps, __pyx_v_p, __pyx_v_shrinking, __pyx_v_probability, __pyx_v_nr_weight, __pyx_v_weight_label->data, __pyx_v_weight->data); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":140 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":141 * * # check parameters * if (problem == NULL or param == NULL): # <<<<<<<<<<<<<< @@ -1218,29 +1218,29 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ } if (__pyx_t_4) { - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":141 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":142 * # check parameters * if (problem == NULL or param == NULL): * raise MemoryError("We've run out of of memory in predict_wrap") # <<<<<<<<<<<<<< * error_msg = svm_check_parameter(problem, param) * if error_msg: */ - __pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 141; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 142; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_INCREF(((PyObject *)__pyx_kp_s_1)); PyTuple_SET_ITEM(__pyx_t_5, 0, ((PyObject *)__pyx_kp_s_1)); __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_1)); - __pyx_t_6 = PyObject_Call(__pyx_builtin_MemoryError, __pyx_t_5, NULL); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 141; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_Call(__pyx_builtin_MemoryError, __pyx_t_5, NULL); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 142; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; __Pyx_Raise(__pyx_t_6, 0, 0); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 141; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[0]; __pyx_lineno = 142; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L7; } __pyx_L7:; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":142 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":143 * if (problem == NULL or param == NULL): * raise MemoryError("We've run out of of memory in predict_wrap") * error_msg = svm_check_parameter(problem, param) # <<<<<<<<<<<<<< @@ -1249,7 +1249,7 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ */ __pyx_v_error_msg = svm_check_parameter(__pyx_v_problem, __pyx_v_param); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":143 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":144 * raise MemoryError("We've run out of of memory in predict_wrap") * error_msg = svm_check_parameter(problem, param) * if error_msg: # <<<<<<<<<<<<<< @@ -1259,7 +1259,7 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ __pyx_t_4 = (__pyx_v_error_msg != 0); if (__pyx_t_4) { - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":144 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":145 * error_msg = svm_check_parameter(problem, param) * if error_msg: * free_problem(problem) # <<<<<<<<<<<<<< @@ -1268,7 +1268,7 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ */ free_problem(__pyx_v_problem); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":145 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":146 * if error_msg: * free_problem(problem) * free_param(param) # <<<<<<<<<<<<<< @@ -1277,31 +1277,31 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ */ free_param(__pyx_v_param); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":146 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":147 * free_problem(problem) * free_param(param) * raise ValueError(error_msg) # <<<<<<<<<<<<<< * * # call svm_train, this does the real work */ - __pyx_t_6 = __Pyx_PyBytes_FromString(__pyx_v_error_msg); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 146; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = __Pyx_PyBytes_FromString(__pyx_v_error_msg); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 147; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 146; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 147; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_t_6); __Pyx_GIVEREF(__pyx_t_6); __pyx_t_6 = 0; - __pyx_t_6 = PyObject_Call(__pyx_builtin_ValueError, __pyx_t_5, NULL); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 146; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_Call(__pyx_builtin_ValueError, __pyx_t_5, NULL); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 147; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; __Pyx_Raise(__pyx_t_6, 0, 0); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 146; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[0]; __pyx_lineno = 147; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L8; } __pyx_L8:; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":150 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":151 * # call svm_train, this does the real work * # maybe we should check that the return model is not null * model = svm_train(problem, param) # <<<<<<<<<<<<<< @@ -1310,7 +1310,7 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ */ __pyx_v_model = svm_train(__pyx_v_problem, __pyx_v_param); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":151 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":152 * # maybe we should check that the return model is not null * model = svm_train(problem, param) * if model == NULL: raise MemoryError # <<<<<<<<<<<<<< @@ -1320,35 +1320,35 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ __pyx_t_4 = (__pyx_v_model == NULL); if (__pyx_t_4) { __Pyx_Raise(__pyx_builtin_MemoryError, 0, 0); - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 151; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[0]; __pyx_lineno = 152; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L9; } __pyx_L9:; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":155 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":156 * # predicted values * cdef np.ndarray[double, ndim=1, mode='c'] dec_values * dec_values = np.empty(T.shape[0]) # <<<<<<<<<<<<<< * if copy_predict(T.data, model, T.shape, dec_values.data) < 0: * raise MemoryError("We've run out of of memory in svm_predict") */ - __pyx_t_6 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 155; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 156; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_5 = PyObject_GetAttr(__pyx_t_6, __pyx_n_s__empty); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 155; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_GetAttr(__pyx_t_6, __pyx_n_s__empty); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 156; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - __pyx_t_6 = __Pyx_PyInt_to_py_npy_intp((__pyx_v_T->dimensions[0])); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 155; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = __Pyx_PyInt_to_py_npy_intp((__pyx_v_T->dimensions[0])); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 156; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_7 = PyTuple_New(1); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 155; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyTuple_New(1); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 156; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); PyTuple_SET_ITEM(__pyx_t_7, 0, __pyx_t_6); __Pyx_GIVEREF(__pyx_t_6); __pyx_t_6 = 0; - __pyx_t_6 = PyObject_Call(__pyx_t_5, __pyx_t_7, NULL); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 155; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_Call(__pyx_t_5, __pyx_t_7, NULL); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 156; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; - if (!(likely(((__pyx_t_6) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_6, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 155; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_6) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_6, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 156; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_8 = ((PyArrayObject *)__pyx_t_6); { __Pyx_BufFmt_StackElem __pyx_stack[1]; @@ -1365,14 +1365,14 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ } __pyx_bstride_0_dec_values = __pyx_bstruct_dec_values.strides[0]; __pyx_bshape_0_dec_values = __pyx_bstruct_dec_values.shape[0]; - if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 155; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 156; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_t_8 = 0; __Pyx_DECREF(((PyObject *)__pyx_v_dec_values)); __pyx_v_dec_values = ((PyArrayObject *)__pyx_t_6); __pyx_t_6 = 0; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":156 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":157 * cdef np.ndarray[double, ndim=1, mode='c'] dec_values * dec_values = np.empty(T.shape[0]) * if copy_predict(T.data, model, T.shape, dec_values.data) < 0: # <<<<<<<<<<<<<< @@ -1382,29 +1382,29 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ __pyx_t_4 = (copy_predict(__pyx_v_T->data, __pyx_v_model, __pyx_v_T->dimensions, __pyx_v_dec_values->data) < 0); if (__pyx_t_4) { - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":157 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":158 * dec_values = np.empty(T.shape[0]) * if copy_predict(T.data, model, T.shape, dec_values.data) < 0: * raise MemoryError("We've run out of of memory in svm_predict") # <<<<<<<<<<<<<< * * # free memory */ - __pyx_t_6 = PyTuple_New(1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 157; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyTuple_New(1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 158; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_INCREF(((PyObject *)__pyx_kp_s_2)); PyTuple_SET_ITEM(__pyx_t_6, 0, ((PyObject *)__pyx_kp_s_2)); __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_2)); - __pyx_t_7 = PyObject_Call(__pyx_builtin_MemoryError, __pyx_t_6, NULL); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 157; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyObject_Call(__pyx_builtin_MemoryError, __pyx_t_6, NULL); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 158; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; __Pyx_Raise(__pyx_t_7, 0, 0); __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 157; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[0]; __pyx_lineno = 158; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L10; } __pyx_L10:; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":160 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":161 * * # free memory * free_model(model) # <<<<<<<<<<<<<< @@ -1413,7 +1413,7 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ */ free_model(__pyx_v_model); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":161 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":162 * # free memory * free_model(model) * free_problem(problem) # <<<<<<<<<<<<<< @@ -1422,7 +1422,7 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ */ free_problem(__pyx_v_problem); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":162 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":163 * free_model(model) * free_problem(problem) * free_param(param) # <<<<<<<<<<<<<< @@ -1431,7 +1431,7 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ */ free_param(__pyx_v_param); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":164 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":165 * free_param(param) * * return dec_values # <<<<<<<<<<<<<< @@ -1481,7 +1481,7 @@ static PyObject *__pyx_pf_6libsvm_predict_wrap(PyObject *__pyx_self, PyObject *_ return __pyx_r; } -/* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":167 +/* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":168 * * * def train_wrap ( np.ndarray[np.double_t, ndim=2, mode='c'] X, # <<<<<<<<<<<<<< @@ -1573,7 +1573,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p PyArrayObject *__pyx_t_17 = NULL; static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__X,&__pyx_n_s__Y,&__pyx_n_s__svm_type,&__pyx_n_s__kernel_type,&__pyx_n_s__degree,&__pyx_n_s__gamma,&__pyx_n_s__coef0,&__pyx_n_s__eps,&__pyx_n_s__C,&__pyx_n_s__nr_weight,&__pyx_n_s__weight_label,&__pyx_n_s__weight,&__pyx_n_s__nu,&__pyx_n_s__cache_size,&__pyx_n_s__p,&__pyx_n_s__shrinking,&__pyx_n_s__probability,0}; __Pyx_RefNannySetupContext("train_wrap"); - __Pyx_TraceCall("train_wrap", __pyx_f[0], 167); + __Pyx_TraceCall("train_wrap", __pyx_f[0], 168); __pyx_self = __pyx_self; if (unlikely(__pyx_kwds)) { Py_ssize_t kw_args = PyDict_Size(__pyx_kwds); @@ -1608,143 +1608,143 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__Y); if (likely(values[1])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 2: values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__svm_type); if (likely(values[2])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 3: values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__kernel_type); if (likely(values[3])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 4: values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__degree); if (likely(values[4])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 5: values[5] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__gamma); if (likely(values[5])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 6: values[6] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__coef0); if (likely(values[6])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 6); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 6); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 7: values[7] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__eps); if (likely(values[7])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 7); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 7); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 8: values[8] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__C); if (likely(values[8])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 8); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 8); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 9: values[9] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__nr_weight); if (likely(values[9])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 9); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 9); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 10: values[10] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__weight_label); if (likely(values[10])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 10); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 10); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 11: values[11] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__weight); if (likely(values[11])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 11); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 11); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 12: values[12] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__nu); if (likely(values[12])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 12); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 12); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 13: values[13] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__cache_size); if (likely(values[13])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 13); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 13); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 14: values[14] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__p); if (likely(values[14])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 14); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 14); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 15: values[15] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__shrinking); if (likely(values[15])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 15); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 15); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 16: values[16] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__probability); if (likely(values[16])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 16); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, 16); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, PyTuple_GET_SIZE(__pyx_args), "train_wrap") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, PyTuple_GET_SIZE(__pyx_args), "train_wrap") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } __pyx_v_X = ((PyArrayObject *)values[0]); __pyx_v_Y = ((PyArrayObject *)values[1]); - __pyx_v_svm_type = __Pyx_PyInt_AsInt(values[2]); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_kernel_type = __Pyx_PyInt_AsInt(values[3]); if (unlikely((__pyx_v_kernel_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_degree = __Pyx_PyInt_AsInt(values[4]); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_gamma = __pyx_PyFloat_AsDouble(values[5]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_coef0 = __pyx_PyFloat_AsDouble(values[6]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_eps = __pyx_PyFloat_AsDouble(values[7]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_C = __pyx_PyFloat_AsDouble(values[8]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_nr_weight = __Pyx_PyInt_AsInt(values[9]); if (unlikely((__pyx_v_nr_weight == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_svm_type = __Pyx_PyInt_AsInt(values[2]); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_kernel_type = __Pyx_PyInt_AsInt(values[3]); if (unlikely((__pyx_v_kernel_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_degree = __Pyx_PyInt_AsInt(values[4]); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_gamma = __pyx_PyFloat_AsDouble(values[5]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_coef0 = __pyx_PyFloat_AsDouble(values[6]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_eps = __pyx_PyFloat_AsDouble(values[7]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_C = __pyx_PyFloat_AsDouble(values[8]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nr_weight = __Pyx_PyInt_AsInt(values[9]); if (unlikely((__pyx_v_nr_weight == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_v_weight_label = ((PyArrayObject *)values[10]); __pyx_v_weight = ((PyArrayObject *)values[11]); - __pyx_v_nu = __pyx_PyFloat_AsDouble(values[12]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_cache_size = __pyx_PyFloat_AsDouble(values[13]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_p = __pyx_PyFloat_AsDouble(values[14]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_shrinking = __Pyx_PyInt_AsInt(values[15]); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_probability = __Pyx_PyInt_AsInt(values[16]); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nu = __pyx_PyFloat_AsDouble(values[12]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_cache_size = __pyx_PyFloat_AsDouble(values[13]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 174; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_p = __pyx_PyFloat_AsDouble(values[14]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 174; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_shrinking = __Pyx_PyInt_AsInt(values[15]); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 174; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_probability = __Pyx_PyInt_AsInt(values[16]); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 174; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else if (PyTuple_GET_SIZE(__pyx_args) != 17) { goto __pyx_L5_argtuple_error; } else { __pyx_v_X = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 0)); __pyx_v_Y = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 1)); - __pyx_v_svm_type = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 2)); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_kernel_type = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 3)); if (unlikely((__pyx_v_kernel_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_degree = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 4)); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_gamma = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 5)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_coef0 = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 6)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_eps = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 7)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_C = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 8)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_nr_weight = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 9)); if (unlikely((__pyx_v_nr_weight == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_svm_type = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 2)); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_kernel_type = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 3)); if (unlikely((__pyx_v_kernel_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_degree = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 4)); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_gamma = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 5)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_coef0 = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 6)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_eps = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 7)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_C = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 8)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nr_weight = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 9)); if (unlikely((__pyx_v_nr_weight == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_v_weight_label = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 10)); __pyx_v_weight = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 11)); - __pyx_v_nu = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 12)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_cache_size = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 13)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_p = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 14)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_shrinking = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 15)); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_probability = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 16)); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nu = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 12)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_cache_size = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 13)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 174; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_p = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 14)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 174; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_shrinking = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 15)); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 174; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_probability = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 16)); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 174; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("train_wrap", 1, 17, 17, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("libsvm.train_wrap"); return NULL; @@ -1767,36 +1767,36 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p __pyx_bstruct_Y.buf = NULL; __pyx_bstruct_weight_label.buf = NULL; __pyx_bstruct_weight.buf = NULL; - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_X), __pyx_ptype_5numpy_ndarray, 1, "X", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_Y), __pyx_ptype_5numpy_ndarray, 1, "Y", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_weight_label), __pyx_ptype_5numpy_ndarray, 1, "weight_label", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_weight), __pyx_ptype_5numpy_ndarray, 1, "weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_X), __pyx_ptype_5numpy_ndarray, 1, "X", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_Y), __pyx_ptype_5numpy_ndarray, 1, "Y", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_weight_label), __pyx_ptype_5numpy_ndarray, 1, "weight_label", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_weight), __pyx_ptype_5numpy_ndarray, 1, "weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L1_error;} { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_X, (PyObject*)__pyx_v_X, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_X, (PyObject*)__pyx_v_X, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_X = __pyx_bstruct_X.strides[0]; __pyx_bstride_1_X = __pyx_bstruct_X.strides[1]; __pyx_bshape_0_X = __pyx_bstruct_X.shape[0]; __pyx_bshape_1_X = __pyx_bstruct_X.shape[1]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_Y, (PyObject*)__pyx_v_Y, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_Y, (PyObject*)__pyx_v_Y, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_Y = __pyx_bstruct_Y.strides[0]; __pyx_bshape_0_Y = __pyx_bstruct_Y.shape[0]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight_label, (PyObject*)__pyx_v_weight_label, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight_label, (PyObject*)__pyx_v_weight_label, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_weight_label = __pyx_bstruct_weight_label.strides[0]; __pyx_bshape_0_weight_label = __pyx_bstruct_weight_label.shape[0]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight, (PyObject*)__pyx_v_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight, (PyObject*)__pyx_v_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_weight = __pyx_bstruct_weight.strides[0]; __pyx_bshape_0_weight = __pyx_bstruct_weight.shape[0]; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":206 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":207 * * # set libsvm problem * problem = set_problem(X.data, Y.data, X.shape) # <<<<<<<<<<<<<< @@ -1805,7 +1805,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ __pyx_v_problem = set_problem(__pyx_v_X->data, __pyx_v_Y->data, __pyx_v_X->dimensions); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":212 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":213 * coef0, nu, cache_size, * C, eps, p, shrinking, probability, * nr_weight, weight_label.data, weight.data) # <<<<<<<<<<<<<< @@ -1814,7 +1814,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ __pyx_v_param = set_parameter(__pyx_v_svm_type, __pyx_v_kernel_type, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_nu, __pyx_v_cache_size, __pyx_v_C, __pyx_v_eps, __pyx_v_p, __pyx_v_shrinking, __pyx_v_probability, __pyx_v_nr_weight, __pyx_v_weight_label->data, __pyx_v_weight->data); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":215 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":216 * * # check parameters * if (param == NULL or problem == NULL): # <<<<<<<<<<<<<< @@ -1830,29 +1830,29 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p } if (__pyx_t_3) { - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":216 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":217 * # check parameters * if (param == NULL or problem == NULL): * raise MemoryError("Seems we've run out of of memory") # <<<<<<<<<<<<<< * error_msg = svm_check_parameter(problem, param); * if error_msg: */ - __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 217; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_INCREF(((PyObject *)__pyx_kp_s_3)); PyTuple_SET_ITEM(__pyx_t_4, 0, ((PyObject *)__pyx_kp_s_3)); __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_3)); - __pyx_t_5 = PyObject_Call(__pyx_builtin_MemoryError, __pyx_t_4, NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_builtin_MemoryError, __pyx_t_4, NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 217; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_Raise(__pyx_t_5, 0, 0); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[0]; __pyx_lineno = 217; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L6; } __pyx_L6:; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":217 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":218 * if (param == NULL or problem == NULL): * raise MemoryError("Seems we've run out of of memory") * error_msg = svm_check_parameter(problem, param); # <<<<<<<<<<<<<< @@ -1861,7 +1861,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ __pyx_v_error_msg = svm_check_parameter(__pyx_v_problem, __pyx_v_param); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":218 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":219 * raise MemoryError("Seems we've run out of of memory") * error_msg = svm_check_parameter(problem, param); * if error_msg: # <<<<<<<<<<<<<< @@ -1871,7 +1871,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p __pyx_t_3 = (__pyx_v_error_msg != 0); if (__pyx_t_3) { - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":219 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":220 * error_msg = svm_check_parameter(problem, param); * if error_msg: * free_problem(problem) # <<<<<<<<<<<<<< @@ -1880,7 +1880,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ free_problem(__pyx_v_problem); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":220 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":221 * if error_msg: * free_problem(problem) * free_param(param) # <<<<<<<<<<<<<< @@ -1889,31 +1889,31 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ free_param(__pyx_v_param); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":221 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":222 * free_problem(problem) * free_param(param) * raise ValueError(error_msg) # <<<<<<<<<<<<<< * * # call svm_train, this does the real work */ - __pyx_t_5 = __Pyx_PyBytes_FromString(__pyx_v_error_msg); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 221; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_PyBytes_FromString(__pyx_v_error_msg); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 222; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 221; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 222; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyObject_Call(__pyx_builtin_ValueError, __pyx_t_4, NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 221; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_builtin_ValueError, __pyx_t_4, NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 222; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_Raise(__pyx_t_5, 0, 0); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 221; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[0]; __pyx_lineno = 222; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L7; } __pyx_L7:; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":224 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":225 * * # call svm_train, this does the real work * model = svm_train(problem, param) # <<<<<<<<<<<<<< @@ -1922,7 +1922,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ __pyx_v_model = svm_train(__pyx_v_problem, __pyx_v_param); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":226 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":227 * model = svm_train(problem, param) * * cdef int nSV = get_l(model) # <<<<<<<<<<<<<< @@ -1931,7 +1931,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ __pyx_v_nSV = get_l(__pyx_v_model); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":227 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":228 * * cdef int nSV = get_l(model) * cdef int nr = get_nr(model) # <<<<<<<<<<<<<< @@ -1940,23 +1940,23 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ __pyx_v_nr = get_nr(__pyx_v_model); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":231 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":232 * # copy model.sv_coef * cdef np.ndarray[np.double_t, ndim=2, mode='c'] sv_coef * sv_coef = np.empty((nr-1, nSV)) # <<<<<<<<<<<<<< * copy_sv_coef(sv_coef.data, model, sv_coef.strides) * */ - __pyx_t_5 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 232; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_4 = PyObject_GetAttr(__pyx_t_5, __pyx_n_s__empty); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetAttr(__pyx_t_5, __pyx_n_s__empty); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 232; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyInt_FromLong((__pyx_v_nr - 1)); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyInt_FromLong((__pyx_v_nr - 1)); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 232; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_6 = PyInt_FromLong(__pyx_v_nSV); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyInt_FromLong(__pyx_v_nSV); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 232; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_7 = PyTuple_New(2); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyTuple_New(2); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 232; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); PyTuple_SET_ITEM(__pyx_t_7, 0, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); @@ -1964,16 +1964,16 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p __Pyx_GIVEREF(__pyx_t_6); __pyx_t_5 = 0; __pyx_t_6 = 0; - __pyx_t_6 = PyTuple_New(1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyTuple_New(1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 232; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); PyTuple_SET_ITEM(__pyx_t_6, 0, __pyx_t_7); __Pyx_GIVEREF(__pyx_t_7); __pyx_t_7 = 0; - __pyx_t_7 = PyObject_Call(__pyx_t_4, __pyx_t_6, NULL); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyObject_Call(__pyx_t_4, __pyx_t_6, NULL); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 232; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - if (!(likely(((__pyx_t_7) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_7, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_7) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_7, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 232; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_8 = ((PyArrayObject *)__pyx_t_7); { __Pyx_BufFmt_StackElem __pyx_stack[1]; @@ -1990,14 +1990,14 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p } __pyx_bstride_0_sv_coef = __pyx_bstruct_sv_coef.strides[0]; __pyx_bstride_1_sv_coef = __pyx_bstruct_sv_coef.strides[1]; __pyx_bshape_0_sv_coef = __pyx_bstruct_sv_coef.shape[0]; __pyx_bshape_1_sv_coef = __pyx_bstruct_sv_coef.shape[1]; - if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 232; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_t_8 = 0; __Pyx_DECREF(((PyObject *)__pyx_v_sv_coef)); __pyx_v_sv_coef = ((PyArrayObject *)__pyx_t_7); __pyx_t_7 = 0; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":232 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":233 * cdef np.ndarray[np.double_t, ndim=2, mode='c'] sv_coef * sv_coef = np.empty((nr-1, nSV)) * copy_sv_coef(sv_coef.data, model, sv_coef.strides) # <<<<<<<<<<<<<< @@ -2006,30 +2006,30 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ copy_sv_coef(__pyx_v_sv_coef->data, __pyx_v_model, __pyx_v_sv_coef->strides); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":236 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":237 * # copy model.rho * cdef np.ndarray[np.double_t, ndim=1, mode='c'] rho * rho = np.empty(nr*(nr-1)/2) # <<<<<<<<<<<<<< * copy_rho(rho.data, model, rho.shape) * */ - __pyx_t_7 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 236; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 237; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); - __pyx_t_6 = PyObject_GetAttr(__pyx_t_7, __pyx_n_s__empty); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 236; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_GetAttr(__pyx_t_7, __pyx_n_s__empty); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 237; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; - __pyx_t_7 = PyInt_FromLong(__Pyx_div_long((__pyx_v_nr * (__pyx_v_nr - 1)), 2)); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 236; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyInt_FromLong(__Pyx_div_long((__pyx_v_nr * (__pyx_v_nr - 1)), 2)); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 237; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); - __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 236; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 237; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_7); __Pyx_GIVEREF(__pyx_t_7); __pyx_t_7 = 0; - __pyx_t_7 = PyObject_Call(__pyx_t_6, __pyx_t_4, NULL); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 236; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyObject_Call(__pyx_t_6, __pyx_t_4, NULL); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 237; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - if (!(likely(((__pyx_t_7) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_7, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 236; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_7) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_7, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 237; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_13 = ((PyArrayObject *)__pyx_t_7); { __Pyx_BufFmt_StackElem __pyx_stack[1]; @@ -2046,14 +2046,14 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p } __pyx_bstride_0_rho = __pyx_bstruct_rho.strides[0]; __pyx_bshape_0_rho = __pyx_bstruct_rho.shape[0]; - if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 236; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 237; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_t_13 = 0; __Pyx_DECREF(((PyObject *)__pyx_v_rho)); __pyx_v_rho = ((PyArrayObject *)__pyx_t_7); __pyx_t_7 = 0; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":237 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":238 * cdef np.ndarray[np.double_t, ndim=1, mode='c'] rho * rho = np.empty(nr*(nr-1)/2) * copy_rho(rho.data, model, rho.shape) # <<<<<<<<<<<<<< @@ -2062,23 +2062,23 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ copy_rho(__pyx_v_rho->data, __pyx_v_model, __pyx_v_rho->dimensions); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":241 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":242 * # copy model.SV * cdef np.ndarray[np.double_t, ndim=2, mode='c'] SV * SV = np.zeros((nSV, X.shape[1])) # <<<<<<<<<<<<<< * copy_SV(SV.data, model, SV.strides) * */ - __pyx_t_7 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 241; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); - __pyx_t_4 = PyObject_GetAttr(__pyx_t_7, __pyx_n_s__zeros); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 241; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetAttr(__pyx_t_7, __pyx_n_s__zeros); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; - __pyx_t_7 = PyInt_FromLong(__pyx_v_nSV); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 241; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyInt_FromLong(__pyx_v_nSV); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); - __pyx_t_6 = __Pyx_PyInt_to_py_npy_intp((__pyx_v_X->dimensions[1])); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 241; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = __Pyx_PyInt_to_py_npy_intp((__pyx_v_X->dimensions[1])); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_5 = PyTuple_New(2); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 241; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyTuple_New(2); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_t_7); __Pyx_GIVEREF(__pyx_t_7); @@ -2086,16 +2086,16 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p __Pyx_GIVEREF(__pyx_t_6); __pyx_t_7 = 0; __pyx_t_6 = 0; - __pyx_t_6 = PyTuple_New(1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 241; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyTuple_New(1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); PyTuple_SET_ITEM(__pyx_t_6, 0, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyObject_Call(__pyx_t_4, __pyx_t_6, NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 241; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_t_4, __pyx_t_6, NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - if (!(likely(((__pyx_t_5) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_5, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 241; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_5) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_5, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_14 = ((PyArrayObject *)__pyx_t_5); { __Pyx_BufFmt_StackElem __pyx_stack[1]; @@ -2112,14 +2112,14 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p } __pyx_bstride_0_SV = __pyx_bstruct_SV.strides[0]; __pyx_bstride_1_SV = __pyx_bstruct_SV.strides[1]; __pyx_bshape_0_SV = __pyx_bstruct_SV.shape[0]; __pyx_bshape_1_SV = __pyx_bstruct_SV.shape[1]; - if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 241; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_t_14 = 0; __Pyx_DECREF(((PyObject *)__pyx_v_SV)); __pyx_v_SV = ((PyArrayObject *)__pyx_t_5); __pyx_t_5 = 0; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":242 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":243 * cdef np.ndarray[np.double_t, ndim=2, mode='c'] SV * SV = np.zeros((nSV, X.shape[1])) * copy_SV(SV.data, model, SV.strides) # <<<<<<<<<<<<<< @@ -2128,40 +2128,40 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ copy_SV(__pyx_v_SV->data, __pyx_v_model, __pyx_v_SV->strides); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":248 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":249 * # of support vectors * cdef np.ndarray[np.int_t, ndim=1, mode='c'] nclass_SV * nclass_SV = np.empty((nr), dtype=np.int) # <<<<<<<<<<<<<< * copy_nSV(nclass_SV.data, model) * */ - __pyx_t_5 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 248; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); 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__pyx_lineno = 248; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 249; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyDict_New(); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 248; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyDict_New(); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 249; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_5)); - __pyx_t_7 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 248; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 249; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); - __pyx_t_15 = PyObject_GetAttr(__pyx_t_7, __pyx_n_s__int); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 248; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyObject_GetAttr(__pyx_t_7, __pyx_n_s__int); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 249; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; - if (PyDict_SetItem(__pyx_t_5, ((PyObject *)__pyx_n_s__dtype), __pyx_t_15) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 248; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_5, ((PyObject *)__pyx_n_s__dtype), __pyx_t_15) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 249; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; - __pyx_t_15 = PyEval_CallObjectWithKeywords(__pyx_t_6, __pyx_t_4, ((PyObject *)__pyx_t_5)); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 248; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyEval_CallObjectWithKeywords(__pyx_t_6, __pyx_t_4, ((PyObject *)__pyx_t_5)); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 249; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; - if (!(likely(((__pyx_t_15) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_15, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 248; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_15) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_15, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 249; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_16 = ((PyArrayObject *)__pyx_t_15); { __Pyx_BufFmt_StackElem __pyx_stack[1]; @@ -2178,14 +2178,14 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p } __pyx_bstride_0_nclass_SV = __pyx_bstruct_nclass_SV.strides[0]; __pyx_bshape_0_nclass_SV = __pyx_bstruct_nclass_SV.shape[0]; - if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 248; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 249; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_t_16 = 0; __Pyx_DECREF(((PyObject *)__pyx_v_nclass_SV)); __pyx_v_nclass_SV = ((PyArrayObject *)__pyx_t_15); __pyx_t_15 = 0; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":249 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":250 * cdef np.ndarray[np.int_t, ndim=1, mode='c'] nclass_SV * nclass_SV = np.empty((nr), dtype=np.int) * copy_nSV(nclass_SV.data, model) # <<<<<<<<<<<<<< @@ -2194,40 +2194,40 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ copy_nSV(__pyx_v_nclass_SV->data, __pyx_v_model); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":252 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":253 * * cdef np.ndarray[np.int_t, ndim=1, mode='c'] label * label = np.empty((nr), dtype=np.int) # <<<<<<<<<<<<<< * copy_label(label.data, model) * */ - __pyx_t_15 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 253; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); - __pyx_t_5 = PyObject_GetAttr(__pyx_t_15, __pyx_n_s__empty); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_GetAttr(__pyx_t_15, __pyx_n_s__empty); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 253; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; - __pyx_t_15 = PyInt_FromLong(__pyx_v_nr); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyInt_FromLong(__pyx_v_nr); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[0]; 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goto __pyx_L1_error;} + __pyx_t_6 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 253; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_7 = PyObject_GetAttr(__pyx_t_6, __pyx_n_s__int); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyObject_GetAttr(__pyx_t_6, __pyx_n_s__int); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 253; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - if (PyDict_SetItem(__pyx_t_15, ((PyObject *)__pyx_n_s__dtype), __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_15, ((PyObject *)__pyx_n_s__dtype), __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 253; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_7); 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goto __pyx_L1_error;} __pyx_t_17 = ((PyArrayObject *)__pyx_t_7); { __Pyx_BufFmt_StackElem __pyx_stack[1]; @@ -2244,14 +2244,14 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p } __pyx_bstride_0_label = __pyx_bstruct_label.strides[0]; __pyx_bshape_0_label = __pyx_bstruct_label.shape[0]; - if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 252; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 253; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_t_17 = 0; __Pyx_DECREF(((PyObject *)__pyx_v_label)); __pyx_v_label = ((PyArrayObject *)__pyx_t_7); __pyx_t_7 = 0; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":253 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":254 * cdef np.ndarray[np.int_t, ndim=1, mode='c'] label * label = np.empty((nr), dtype=np.int) * copy_label(label.data, model) # <<<<<<<<<<<<<< @@ -2260,7 +2260,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ copy_label(__pyx_v_label->data, __pyx_v_model); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":255 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":256 * copy_label(label.data, model) * * free_model(model) # <<<<<<<<<<<<<< @@ -2269,7 +2269,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ free_model(__pyx_v_model); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":256 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":257 * * free_model(model) * free_problem(problem) # <<<<<<<<<<<<<< @@ -2278,7 +2278,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ free_problem(__pyx_v_problem); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":257 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":258 * free_model(model) * free_problem(problem) * free_param(param) # <<<<<<<<<<<<<< @@ -2287,7 +2287,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p */ free_param(__pyx_v_param); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":259 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":260 * free_param(param) * * return sv_coef, rho, SV, nr, nclass_SV, label # <<<<<<<<<<<<<< @@ -2295,9 +2295,9 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p * */ __Pyx_XDECREF(__pyx_r); - __pyx_t_7 = PyInt_FromLong(__pyx_v_nr); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 259; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyInt_FromLong(__pyx_v_nr); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 260; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); - __pyx_t_15 = PyTuple_New(6); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 259; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyTuple_New(6); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 260; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_INCREF(((PyObject *)__pyx_v_sv_coef)); PyTuple_SET_ITEM(__pyx_t_15, 0, ((PyObject *)__pyx_v_sv_coef)); @@ -2370,7 +2370,7 @@ static PyObject *__pyx_pf_6libsvm_train_wrap(PyObject *__pyx_self, PyObject *__p return __pyx_r; } -/* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":262 +/* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":263 * * * def predict_from_model_wrap(np.ndarray[np.double_t, ndim=2, mode='c'] T, # <<<<<<<<<<<<<< @@ -2451,7 +2451,7 @@ static PyObject *__pyx_pf_6libsvm_predict_from_model_wrap(PyObject *__pyx_self, int __pyx_t_9; static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__T,&__pyx_n_s__SV,&__pyx_n_s__sv_coef,&__pyx_n_s__rho,&__pyx_n_s__svm_type,&__pyx_n_s__kernel_type,&__pyx_n_s__degree,&__pyx_n_s__gamma,&__pyx_n_s__coef0,&__pyx_n_s__eps,&__pyx_n_s__C,&__pyx_n_s__nr_weight,&__pyx_n_s__weight_label,&__pyx_n_s__weight,&__pyx_n_s__nu,&__pyx_n_s__cache_size,&__pyx_n_s__p,&__pyx_n_s__shrinking,&__pyx_n_s__probability,&__pyx_n_s__nr_class,&__pyx_n_s__nSV,&__pyx_n_s__label,0}; __Pyx_RefNannySetupContext("predict_from_model_wrap"); - __Pyx_TraceCall("predict_from_model_wrap", __pyx_f[0], 262); + __Pyx_TraceCall("predict_from_model_wrap", __pyx_f[0], 263); __pyx_self = __pyx_self; if (unlikely(__pyx_kwds)) { Py_ssize_t kw_args = PyDict_Size(__pyx_kwds); @@ -2491,152 +2491,152 @@ static PyObject *__pyx_pf_6libsvm_predict_from_model_wrap(PyObject *__pyx_self, values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__SV); if (likely(values[1])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 2: values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__sv_coef); if (likely(values[2])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 3: values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__rho); if (likely(values[3])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 4: values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__svm_type); if (likely(values[4])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 5: values[5] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__kernel_type); if (likely(values[5])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 6: values[6] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__degree); if (likely(values[6])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 6); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 6); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 7: values[7] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__gamma); if (likely(values[7])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 7); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 7); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 8: values[8] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__coef0); if (likely(values[8])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 8); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 8); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 9: values[9] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__eps); if (likely(values[9])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 9); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 9); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 10: values[10] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__C); if (likely(values[10])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 10); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 10); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 11: values[11] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__nr_weight); if (likely(values[11])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 11); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 11); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 12: values[12] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__weight_label); if (likely(values[12])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 12); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 12); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 13: values[13] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__weight); if (likely(values[13])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 13); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 13); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 14: values[14] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__nu); if (likely(values[14])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 14); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 14); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 15: values[15] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__cache_size); if (likely(values[15])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 15); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 15); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 16: values[16] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__p); if (likely(values[16])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 16); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 16); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 17: values[17] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__shrinking); if (likely(values[17])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 17); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 17); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 18: values[18] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__probability); if (likely(values[18])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 18); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 18); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 19: values[19] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__nr_class); if (likely(values[19])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 19); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 19); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 20: values[20] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__nSV); if (likely(values[20])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 20); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 20); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 21: values[21] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__label); if (likely(values[21])) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 21); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, 21); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, PyTuple_GET_SIZE(__pyx_args), "predict_from_model_wrap") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, PyTuple_GET_SIZE(__pyx_args), "predict_from_model_wrap") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } __pyx_v_T = ((PyArrayObject *)values[0]); __pyx_v_SV = ((PyArrayObject *)values[1]); __pyx_v_sv_coef = ((PyArrayObject *)values[2]); __pyx_v_rho = ((PyArrayObject *)values[3]); - __pyx_v_svm_type = __Pyx_PyInt_AsInt(values[4]); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 266; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_kernel_type = __Pyx_PyInt_AsInt(values[5]); if (unlikely((__pyx_v_kernel_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 266; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_degree = __Pyx_PyInt_AsInt(values[6]); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 266; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_gamma = __pyx_PyFloat_AsDouble(values[7]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_coef0 = __pyx_PyFloat_AsDouble(values[8]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_eps = __pyx_PyFloat_AsDouble(values[9]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_C = __pyx_PyFloat_AsDouble(values[10]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 268; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_nr_weight = __Pyx_PyInt_AsInt(values[11]); if (unlikely((__pyx_v_nr_weight == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 268; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_svm_type = __Pyx_PyInt_AsInt(values[4]); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_kernel_type = __Pyx_PyInt_AsInt(values[5]); if (unlikely((__pyx_v_kernel_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_degree = __Pyx_PyInt_AsInt(values[6]); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_gamma = __pyx_PyFloat_AsDouble(values[7]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 268; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_coef0 = __pyx_PyFloat_AsDouble(values[8]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 268; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_eps = __pyx_PyFloat_AsDouble(values[9]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 268; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_C = __pyx_PyFloat_AsDouble(values[10]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 269; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nr_weight = __Pyx_PyInt_AsInt(values[11]); if (unlikely((__pyx_v_nr_weight == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 269; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_v_weight_label = ((PyArrayObject *)values[12]); __pyx_v_weight = ((PyArrayObject *)values[13]); - __pyx_v_nu = __pyx_PyFloat_AsDouble(values[14]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 271; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_cache_size = __pyx_PyFloat_AsDouble(values[15]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 271; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_p = __pyx_PyFloat_AsDouble(values[16]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 271; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_shrinking = __Pyx_PyInt_AsInt(values[17]); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 271; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_probability = __Pyx_PyInt_AsInt(values[18]); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_nr_class = __Pyx_PyInt_AsInt(values[19]); if (unlikely((__pyx_v_nr_class == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nu = __pyx_PyFloat_AsDouble(values[14]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_cache_size = __pyx_PyFloat_AsDouble(values[15]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_p = __pyx_PyFloat_AsDouble(values[16]); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_shrinking = __Pyx_PyInt_AsInt(values[17]); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_probability = __Pyx_PyInt_AsInt(values[18]); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 273; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nr_class = __Pyx_PyInt_AsInt(values[19]); if (unlikely((__pyx_v_nr_class == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 273; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_v_nSV = ((PyArrayObject *)values[20]); __pyx_v_label = ((PyArrayObject *)values[21]); } else if (PyTuple_GET_SIZE(__pyx_args) != 22) { @@ -2646,28 +2646,28 @@ static PyObject *__pyx_pf_6libsvm_predict_from_model_wrap(PyObject *__pyx_self, __pyx_v_SV = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 1)); __pyx_v_sv_coef = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 2)); __pyx_v_rho = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 3)); - __pyx_v_svm_type = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 4)); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 266; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_kernel_type = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 5)); if (unlikely((__pyx_v_kernel_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 266; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_degree = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 6)); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 266; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_gamma = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 7)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_coef0 = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 8)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_eps = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 9)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_C = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 10)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 268; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_nr_weight = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 11)); if (unlikely((__pyx_v_nr_weight == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 268; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_svm_type = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 4)); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_kernel_type = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 5)); if (unlikely((__pyx_v_kernel_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_degree = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 6)); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_gamma = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 7)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 268; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_coef0 = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 8)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 268; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_eps = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 9)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 268; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_C = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 10)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 269; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nr_weight = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 11)); if (unlikely((__pyx_v_nr_weight == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 269; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_v_weight_label = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 12)); __pyx_v_weight = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 13)); - __pyx_v_nu = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 14)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 271; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_cache_size = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 15)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 271; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_p = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 16)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 271; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_shrinking = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 17)); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 271; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_probability = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 18)); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_nr_class = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 19)); if (unlikely((__pyx_v_nr_class == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nu = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 14)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_cache_size = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 15)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_p = __pyx_PyFloat_AsDouble(PyTuple_GET_ITEM(__pyx_args, 16)); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_shrinking = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 17)); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_probability = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 18)); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 273; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_nr_class = __Pyx_PyInt_AsInt(PyTuple_GET_ITEM(__pyx_args, 19)); if (unlikely((__pyx_v_nr_class == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 273; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_v_nSV = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 20)); __pyx_v_label = ((PyArrayObject *)PyTuple_GET_ITEM(__pyx_args, 21)); } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("predict_from_model_wrap", 1, 22, 22, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("libsvm.predict_from_model_wrap"); return NULL; @@ -2690,64 +2690,64 @@ static PyObject *__pyx_pf_6libsvm_predict_from_model_wrap(PyObject *__pyx_self, __pyx_bstruct_weight.buf = NULL; __pyx_bstruct_nSV.buf = NULL; __pyx_bstruct_label.buf = NULL; - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_T), __pyx_ptype_5numpy_ndarray, 1, "T", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_SV), __pyx_ptype_5numpy_ndarray, 1, "SV", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sv_coef), __pyx_ptype_5numpy_ndarray, 1, "sv_coef", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 264; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_rho), __pyx_ptype_5numpy_ndarray, 1, "rho", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 265; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_weight_label), __pyx_ptype_5numpy_ndarray, 1, "weight_label", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 269; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_weight), __pyx_ptype_5numpy_ndarray, 1, "weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_nSV), __pyx_ptype_5numpy_ndarray, 1, "nSV", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 273; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_label), __pyx_ptype_5numpy_ndarray, 1, "label", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 274; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_T), __pyx_ptype_5numpy_ndarray, 1, "T", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_SV), __pyx_ptype_5numpy_ndarray, 1, "SV", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 264; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sv_coef), __pyx_ptype_5numpy_ndarray, 1, "sv_coef", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 265; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_rho), __pyx_ptype_5numpy_ndarray, 1, "rho", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 266; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_weight_label), __pyx_ptype_5numpy_ndarray, 1, "weight_label", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_weight), __pyx_ptype_5numpy_ndarray, 1, "weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 271; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_nSV), __pyx_ptype_5numpy_ndarray, 1, "nSV", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 274; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_label), __pyx_ptype_5numpy_ndarray, 1, "label", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 275; __pyx_clineno = __LINE__; goto __pyx_L1_error;} { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_T, (PyObject*)__pyx_v_T, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_T, (PyObject*)__pyx_v_T, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_T = __pyx_bstruct_T.strides[0]; __pyx_bstride_1_T = __pyx_bstruct_T.strides[1]; __pyx_bshape_0_T = __pyx_bstruct_T.shape[0]; __pyx_bshape_1_T = __pyx_bstruct_T.shape[1]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_SV, (PyObject*)__pyx_v_SV, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_SV, (PyObject*)__pyx_v_SV, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_SV = __pyx_bstruct_SV.strides[0]; __pyx_bstride_1_SV = __pyx_bstruct_SV.strides[1]; __pyx_bshape_0_SV = __pyx_bstruct_SV.shape[0]; __pyx_bshape_1_SV = __pyx_bstruct_SV.shape[1]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_sv_coef, (PyObject*)__pyx_v_sv_coef, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_sv_coef, (PyObject*)__pyx_v_sv_coef, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_sv_coef = __pyx_bstruct_sv_coef.strides[0]; __pyx_bstride_1_sv_coef = __pyx_bstruct_sv_coef.strides[1]; __pyx_bshape_0_sv_coef = __pyx_bstruct_sv_coef.shape[0]; __pyx_bshape_1_sv_coef = __pyx_bstruct_sv_coef.shape[1]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_rho, (PyObject*)__pyx_v_rho, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_rho, (PyObject*)__pyx_v_rho, &__Pyx_TypeInfo_nn___pyx_t_5numpy_double_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_rho = __pyx_bstruct_rho.strides[0]; __pyx_bshape_0_rho = __pyx_bstruct_rho.shape[0]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight_label, (PyObject*)__pyx_v_weight_label, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight_label, (PyObject*)__pyx_v_weight_label, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_weight_label = __pyx_bstruct_weight_label.strides[0]; __pyx_bshape_0_weight_label = __pyx_bstruct_weight_label.shape[0]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight, (PyObject*)__pyx_v_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_weight, (PyObject*)__pyx_v_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_weight = __pyx_bstruct_weight.strides[0]; __pyx_bshape_0_weight = __pyx_bstruct_weight.shape[0]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_nSV, (PyObject*)__pyx_v_nSV, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_nSV, (PyObject*)__pyx_v_nSV, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_nSV = __pyx_bstruct_nSV.strides[0]; __pyx_bshape_0_nSV = __pyx_bstruct_nSV.shape[0]; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_label, (PyObject*)__pyx_v_label, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 262; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_bstruct_label, (PyObject*)__pyx_v_label, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_bstride_0_label = __pyx_bstruct_label.strides[0]; __pyx_bshape_0_label = __pyx_bstruct_label.shape[0]; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":307 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":308 * coef0, nu, cache_size, C, eps, p, shrinking, * probability, nr_weight, weight_label.data, * weight.data) # <<<<<<<<<<<<<< @@ -2756,7 +2756,7 @@ static PyObject *__pyx_pf_6libsvm_predict_from_model_wrap(PyObject *__pyx_self, */ __pyx_v_param = set_parameter(__pyx_v_svm_type, __pyx_v_kernel_type, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_nu, __pyx_v_cache_size, __pyx_v_C, __pyx_v_eps, __pyx_v_p, __pyx_v_shrinking, __pyx_v_probability, __pyx_v_nr_weight, __pyx_v_weight_label->data, __pyx_v_weight->data); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":309 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":310 * weight.data) * model = set_model(param, nr_class, SV.data, SV.shape, sv_coef.strides, * sv_coef.data, rho.data, nSV.data, label.data) # <<<<<<<<<<<<<< @@ -2765,30 +2765,30 @@ static PyObject *__pyx_pf_6libsvm_predict_from_model_wrap(PyObject *__pyx_self, */ __pyx_v_model = set_model(__pyx_v_param, __pyx_v_nr_class, __pyx_v_SV->data, __pyx_v_SV->dimensions, __pyx_v_sv_coef->strides, __pyx_v_sv_coef->data, __pyx_v_rho->data, __pyx_v_nSV->data, __pyx_v_label->data); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":310 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":311 * model = set_model(param, nr_class, SV.data, SV.shape, sv_coef.strides, * sv_coef.data, rho.data, nSV.data, label.data) * dec_values = np.empty(T.shape[0]) # <<<<<<<<<<<<<< * if copy_predict(T.data, model, T.shape, dec_values.data) < 0: * raise MemoryError("We've run out of of memory") */ - __pyx_t_1 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 310; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_GetName(__pyx_m, __pyx_n_s__np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 311; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyObject_GetAttr(__pyx_t_1, __pyx_n_s__empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 310; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_GetAttr(__pyx_t_1, __pyx_n_s__empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 311; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - __pyx_t_1 = __Pyx_PyInt_to_py_npy_intp((__pyx_v_T->dimensions[0])); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 310; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyInt_to_py_npy_intp((__pyx_v_T->dimensions[0])); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 311; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 310; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 311; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_1); __Pyx_GIVEREF(__pyx_t_1); __pyx_t_1 = 0; - __pyx_t_1 = PyObject_Call(__pyx_t_2, __pyx_t_3, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 310; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(__pyx_t_2, __pyx_t_3, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 311; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 310; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 311; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_4 = ((PyArrayObject *)__pyx_t_1); { __Pyx_BufFmt_StackElem __pyx_stack[1]; @@ -2805,14 +2805,14 @@ static PyObject *__pyx_pf_6libsvm_predict_from_model_wrap(PyObject *__pyx_self, } __pyx_bstride_0_dec_values = __pyx_bstruct_dec_values.strides[0]; __pyx_bshape_0_dec_values = __pyx_bstruct_dec_values.shape[0]; - if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 310; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 311; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_t_4 = 0; __Pyx_DECREF(((PyObject *)__pyx_v_dec_values)); __pyx_v_dec_values = ((PyArrayObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":311 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":312 * sv_coef.data, rho.data, nSV.data, label.data) * dec_values = np.empty(T.shape[0]) * if copy_predict(T.data, model, T.shape, dec_values.data) < 0: # <<<<<<<<<<<<<< @@ -2822,46 +2822,55 @@ static PyObject *__pyx_pf_6libsvm_predict_from_model_wrap(PyObject *__pyx_self, __pyx_t_9 = (copy_predict(__pyx_v_T->data, __pyx_v_model, __pyx_v_T->dimensions, __pyx_v_dec_values->data) < 0); if (__pyx_t_9) { - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":312 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":313 * dec_values = np.empty(T.shape[0]) * if copy_predict(T.data, model, T.shape, dec_values.data) < 0: * raise MemoryError("We've run out of of memory") # <<<<<<<<<<<<<< * # free model and param - * free_model(model) + * free_model_SV(model) */ - __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 312; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_INCREF(((PyObject *)__pyx_kp_s_4)); PyTuple_SET_ITEM(__pyx_t_1, 0, ((PyObject *)__pyx_kp_s_4)); __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_4)); - __pyx_t_3 = PyObject_Call(__pyx_builtin_MemoryError, __pyx_t_1, NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 312; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(__pyx_builtin_MemoryError, __pyx_t_1, NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_Raise(__pyx_t_3, 0, 0); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 312; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L6; } __pyx_L6:; - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":314 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":315 * raise MemoryError("We've run out of of memory") * # free model and param + * free_model_SV(model) # <<<<<<<<<<<<<< + * free_model(model) + * free_param(param) + */ + free_model_SV(__pyx_v_model); + + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":316 + * # free model and param + * free_model_SV(model) * free_model(model) # <<<<<<<<<<<<<< * free_param(param) * return dec_values */ free_model(__pyx_v_model); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":315 - * # free model and param + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":317 + * free_model_SV(model) * free_model(model) * free_param(param) # <<<<<<<<<<<<<< * return dec_values */ free_param(__pyx_v_param); - /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":316 + /* "/volatile/fabian/dev/scikit-learn/scikits/learn/src/libsvm.pyx":318 * free_model(model) * free_param(param) * return dec_values # <<<<<<<<<<<<<< @@ -4965,8 +4974,8 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {0, 0, 0, 0, 0, 0, 0} }; static int __Pyx_InitCachedBuiltins(void) { - __pyx_builtin_MemoryError = __Pyx_GetName(__pyx_b, __pyx_n_s__MemoryError); if (!__pyx_builtin_MemoryError) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 141; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_builtin_ValueError = __Pyx_GetName(__pyx_b, __pyx_n_s__ValueError); if (!__pyx_builtin_ValueError) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 146; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_builtin_MemoryError = __Pyx_GetName(__pyx_b, __pyx_n_s__MemoryError); if (!__pyx_builtin_MemoryError) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 142; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_builtin_ValueError = __Pyx_GetName(__pyx_b, __pyx_n_s__ValueError); if (!__pyx_builtin_ValueError) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 147; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_builtin_range = __Pyx_GetName(__pyx_b, __pyx_n_s__range); if (!__pyx_builtin_range) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_builtin_RuntimeError = __Pyx_GetName(__pyx_b, __pyx_n_s__RuntimeError); if (!__pyx_builtin_RuntimeError) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 786; __pyx_clineno = __LINE__; goto __pyx_L1_error;} return 0; diff --git a/scikits/learn/src/libsvm.pyx b/scikits/learn/src/libsvm.pyx index b30e184e68..1fa66ffe0d 100644 --- a/scikits/learn/src/libsvm.pyx +++ b/scikits/learn/src/libsvm.pyx @@ -73,6 +73,7 @@ cdef extern from "libsvm_helper.c": np.npy_intp get_nr (svm_model *) int free_problem (svm_problem *) int free_model (svm_model *) + int free_model_SV(svm_model *) int free_param (svm_parameter *) @@ -311,6 +312,7 @@ def predict_from_model_wrap(np.ndarray[np.double_t, ndim=2, mode='c'] T, if copy_predict(T.data, model, T.shape, dec_values.data) < 0: raise MemoryError("We've run out of of memory") # free model and param + free_model_SV(model) free_model(model) free_param(param) return dec_values diff --git a/scikits/learn/src/libsvm_helper.c b/scikits/learn/src/libsvm_helper.c index eac64ea4a6..05123f8636 100644 --- a/scikits/learn/src/libsvm_helper.c +++ b/scikits/learn/src/libsvm_helper.c @@ -195,8 +195,8 @@ struct svm_model *set_model(struct svm_parameter *param, int nr_class, model->probA = (double *) malloc(sizeof(double)); model->probB = (double *) malloc(sizeof(double)); - /* tell svn_destroy_model to also free the support vectors */ - model->free_sv = 1; + /* We'll free SV ourselves */ + model->free_sv = 0; return model; } @@ -326,6 +326,14 @@ int free_model(struct svm_model *model) return 0; } +int free_model_SV(struct svm_model *model) +{ + register int i; + for (i=model->l-1; i>=0; --i) free(model->SV[i]); + /* svn_destroy_model frees model->SV */ + return 0; +} + int free_param(struct svm_parameter *param) { if (param == NULL) return -1; -- GitLab