diff --git a/index.html b/index.html index c3cb837c449c6c90ea6426d6a0b0cc25af4ee374..12b9485d5a9ff62fd889920d4ae07bf709f51b46 100644 --- a/index.html +++ b/index.html @@ -27,7 +27,9 @@ <!-- MAIN CONTENT --> <div id="main_content_wrap" class="outer"> <section id="main_content" class="inner"> - <h2> + <p>Following an engineering degree in modeling biological system, a master degree in modeling complex system and a PhD in statistics, my research focuses on the modeling of human systems (culture, languages, societies) using biological dataset.</p> + +<h2> <a id="current-projects" class="anchor" href="#current-projects" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>Current Projects</h2> <h3> @@ -48,15 +50,15 @@ <h2> <a id="publications" class="anchor" href="#publications" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>Publications</h2> -<p>Guillot E.G. and Cox MP. High Frequency Haplotypes are Expected Events, not Historical Figures [version 2; referees: 1 approved, 2 approved with reservations] F1000Research 2015, 4:666 (doi: 10.12688/f1000research.7023.2)</p> +<p>Guillot E.G. and Cox MP. High Frequency Haplotypes are Expected Events, not Historical Figures [version 2; referees: 1 approved, 2 approved with reservations] F1000Research 2015, 4:666 (doi: <a href="10.12688/f1000research.7023.2">10.12688/f1000research.7023.2</a>)</p> -<p>Guillot, E.G., M.L. Hazelton, T.M. Karafet, J.S. Lansing, H. Sudoyo and M.P. Cox. 2015. Relaxed Observance of Traditional Marriage Rules Allows Social Connectivity without Loss of Genetic Diversity. Molecular Biology and Evolution 32:2254-2262</p> +<p>Guillot, E.G., M.L. Hazelton, T.M. Karafet, J.S. Lansing, H. Sudoyo and M.P. Cox. 2015. Relaxed Observance of Traditional Marriage Rules Allows Social Connectivity without Loss of Genetic Diversity. Molecular Biology and Evolution 32:2254-2262 <a href="10.1093/molbev/msv102">doi: 10.1093/molbev/msv102</a></p> -<p>Guillot, E.G. and M.P. Cox. 2014. SMARTPOP: Inferring the Impact of Social Dynamics on Genetic Diversity through High Speed Simulations. BMC Bioinformatics 15:175 doi 10.1186/1471210515175</p> +<p>Guillot, E.G. and M.P. Cox. 2014. SMARTPOP: Inferring the Impact of Social Dynamics on Genetic Diversity through High Speed Simulations. BMC Bioinformatics 15:175 doi <a href="10.1186/1471210515175">10.1186/1471210515175</a></p> -<p>Guillot, E.G., M.K. Tumonggor, J.S. Lansing, H. Sudoyo and M.P. Cox. 2013. Climate Change Influenced Female Population Sizes through Time across the Indonesian Archipelago. Human Biology 85:135152 doi : 10.3378/027.085.0306</p> +<p>Guillot, E.G., M.K. Tumonggor, J.S. Lansing, H. Sudoyo and M.P. Cox. 2013. Climate Change Influenced Female Population Sizes through Time across the Indonesian Archipelago. Human Biology 85:135152 doi :<a href="10.3378/027.085.0306"> 10.3378/027.085.0306</a></p> -<p>Moussaïd, M., E.G. Guillot, M. Moreau, J. Fehrenbach, O. Chabiron, S. Lemercier, J. Pettré, C. AppertRolland, P. Degond and G. Theraulaz. 2012. Traffic Instabilities in self- organized pedestrian crowds. PLoS Computational Biology 8, 3: e100244 doi : 10.1371/journal.pcbi.1002442</p> +<p>Moussaïd, M., E.G. Guillot, M. Moreau, J. Fehrenbach, O. Chabiron, S. Lemercier, J. Pettré, C. AppertRolland, P. Degond and G. Theraulaz. 2012. Traffic Instabilities in self- organized pedestrian crowds. PLoS Computational Biology 8, 3: e100244 doi : <a href="10.1371/journal.pcbi.1002442">10.1371/journal.pcbi.1002442</a></p> <h2> <a id="cv" class="anchor" href="#cv" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>CV</h2> @@ -64,33 +66,38 @@ <h3> <a id="2015-2016-post-doctorat" class="anchor" href="#2015-2016-post-doctorat" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>2015-2016 Post-Doctorat</h3> -<p>Département Écologie Évolution, Université de Lausanne, Suisse -With Prof. Marc Robinson-Rechavi and Prof Jérôme Goudet</p> +<p><a href="https://www.unil.ch/dee/home.html">Département Écolgie et Évolution</a>, Université de Lausanne, Suisse</p> + +<p>With Prof. <a href="http://www.unil.ch/dee/home/menuinst/people/group-leaders/prof-marc-robinson-rechavi.html">Marc Robinson-Réchavi</a> and Prof <a href="http://www.unil.ch/dee/home/menuinst/people/group-leaders/prof-jerome-goudet.html">Jérôme Goudet</a></p> <h3> <a id="2011-2015-phd-in-statistics" class="anchor" href="#2011-2015-phd-in-statistics" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>2011-2015 PhD in statistics</h3> <p>“Modeling the role of social construct in population genetics” -Institut des sciences fondamentales (IFS), Massey University, Palmerston North, Nouvelle-Zélande (NZ) -Distinction : Dean's list of exceptionnal thesis -Supervised by Prof. Murray P Cox and Prof. Martin L Hazelton</p> +<a href="http://ifs.massey.ac.nz/">Institute of fundamental Sciences</a> (IFS), Massey University, Palmerston North, Nouvelle-Zélande (NZ)</p> + +<p>Distinction : Dean's list of exceptionnal thesis</p> + +<p>Supervised by Prof. <a href="http://massey.genomicus.com/">Murray P Cox</a> and Prof. <a href="http://www.massey.ac.nz/%7Emhazelto/">Martin L Hazelton</a></p> <h3> <a id="2010-2011-master-computer-sciences-option-modeling-of-complex-systems" class="anchor" href="#2010-2011-master-computer-sciences-option-modeling-of-complex-systems" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>2010-2011 Master, computer sciences option modeling of complex systems</h3> -<p>École Normale Supérieure (ENS), Lyon, France</p> +<p><a href="http://www.ens-lyon.fr/MasterSDM/en/master-2/m2-complex-systems">IXXI</a>, École Normale Supérieure (ENS), Lyon, France</p> <h3> <a id="2006-2011-master-of-engineering-speciality-in-bioinformatics-and-modeling" class="anchor" href="#2006-2011-master-of-engineering-speciality-in-bioinformatics-and-modeling" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>2006-2011 Master of Engineering, speciality in bioinformatics and modeling</h3> -<p>Institut National des Sciences Appliquées (INSA), Lyon, France</p> +<p><a href="http://bim.insa-lyon.fr/en">BIM</a>, Institut National des Sciences Appliquées (INSA), Lyon, France</p> <h3> <a id="2011-master-project" class="anchor" href="#2011-master-project" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>2011 Master project</h3> -<p>"Modeling bidirectional flow of pedestrians" -CRCA, University Paul Sabatier, Toulouse, France -With Prof. Guy Theraulaz</p> +<p>"Modeling bidirectional flow of pedestrians"</p> + +<p><a href="http://cognition.ups-tlse.fr/?lang=en">CRCA</a>, University Paul Sabatier, Toulouse, France</p> + +<p>With Prof. <a href="http://cognition.ups-tlse.fr/spip.php?article182&lang=fr">Guy Theraulaz</a></p> <h2> <a id="software" class="anchor" href="#software" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>Software</h2> @@ -98,14 +105,16 @@ With Prof. Guy Theraulaz</p> <h3> <a id="smartpop" class="anchor" href="#smartpop" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>SMARTPOP</h3> -<p>Forward in Time simulations of structured population genetics -<a href="http://smartpop.sourceforge.net">http://smartpop.sourceforge.net</a></p> +<p>Forward in Time simulations of structured population genetics</p> + +<p><a href="http://smartpop.sourceforge.net">http://smartpop.sourceforge.net</a></p> <h3> <a id="carpntrees" class="anchor" href="#carpntrees" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>CARPnTREES</h3> -<p>Reconstructing female and male lineages from haplogroups in humans (with Marie Zufferey) -<a href="http://carpntrees.shinyapps.io/shinyapp">http://carpntrees.shinyapps.io/shinyapp</a></p> +<p>Reconstructing female and male lineages from haplogroups in humans (with Marie Zufferey)</p> + +<p><a href="http://carpntrees.shinyapps.io/shinyapp">http://carpntrees.shinyapps.io/shinyapp</a></p> <h2> <a id="research-interests" class="anchor" href="#research-interests" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>Research Interests</h2> @@ -139,6 +148,8 @@ With Prof. Guy Theraulaz</p> <p>Outreach</p> <p><a href="http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html">http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html</a></p> + +<p>Twitter: <a href="https://twitter.com/elza_guillot">@elza_guillot</a></p> </section> </div> diff --git a/params.json b/params.json index 39be2f0128161a83702973f79f8b75ad1fa035fb..d8e8874275208636d4db6744e7f2d7b469574e2f 100644 --- a/params.json +++ b/params.json @@ -1 +1,7 @@ -{"name":"Elsa G Guillot","tagline":"Computational Biostatistics","body":"\r\n## Current Projects\r\n\r\n### Inferring selection from human population genetics\r\nWith Jerome Goudet (UNIL) and Marc Robinson-Réchavi (UNIL)\r\n\r\n### Effect of sampling bias on human population genetics\r\nWith Jerome Goudet (UNIL) and Loic Pillard (UNIL)\r\n\r\n### Effect of marriages rules on population genetics\r\nWith Murray Cox (Massey University) and Steve Lansing (Nanyang Technological University)\r\n\r\n## Publications\r\nGuillot E.G. and Cox MP. High Frequency Haplotypes are Expected Events, not Historical Figures [version 2; referees: 1 approved, 2 approved with reservations] F1000Research 2015, 4:666 (doi: 10.12688/f1000research.7023.2)\r\n\r\nGuillot, E.G., M.L. Hazelton, T.M. Karafet, J.S. Lansing, H. Sudoyo and M.P. Cox. 2015. Relaxed Observance of Traditional Marriage Rules Allows Social Connectivity without Loss of Genetic Diversity. Molecular Biology and Evolution 32:2254-2262\r\n\r\nGuillot, E.G. and M.P. Cox. 2014. SMARTPOP: Inferring the Impact of Social Dynamics on Genetic Diversity through High Speed Simulations. BMC Bioinformatics 15:175 doi 10.1186/1471210515175\r\n\r\nGuillot, E.G., M.K. Tumonggor, J.S. Lansing, H. Sudoyo and M.P. Cox. 2013. Climate Change Influenced Female Population Sizes through Time across the Indonesian Archipelago. Human Biology 85:135152 doi : 10.3378/027.085.0306\r\n\r\nMoussaïd, M., E.G. Guillot, M. Moreau, J. Fehrenbach, O. Chabiron, S. Lemercier, J. Pettré, C. AppertRolland, P. Degond and G. Theraulaz. 2012. Traffic Instabilities in self- organized pedestrian crowds. PLoS Computational Biology 8, 3: e100244 doi : 10.1371/journal.pcbi.1002442\r\n\r\n## CV\r\n\r\n### 2015-2016 Post-Doctorat \r\nDépartement Écologie Évolution, Université de Lausanne, Suisse\r\nWith Prof. Marc Robinson-Rechavi and Prof Jérôme Goudet\r\n\r\n### 2011-2015 PhD in statistics \r\n“Modeling the role of social construct in population genetics”\r\nInstitut des sciences fondamentales (IFS), Massey University, Palmerston North, Nouvelle-Zélande (NZ)\r\nDistinction : Dean's list of exceptionnal thesis\r\nSupervised by Prof. Murray P Cox and Prof. Martin L Hazelton\r\n\r\n### 2010-2011 Master, computer sciences option modeling of complex systems\r\nÉcole Normale Supérieure (ENS), Lyon, France\r\n\r\n### 2006-2011 Master of Engineering, speciality in bioinformatics and modeling\r\nInstitut National des Sciences Appliquées (INSA), Lyon, France\r\n\r\n### 2011 Master project\r\n\"Modeling bidirectional flow of pedestrians\"\r\nCRCA, University Paul Sabatier, Toulouse, France\r\nWith Prof. Guy Theraulaz\r\n\r\n\r\n## Software\r\n\r\n### SMARTPOP \r\nForward in Time simulations of structured population genetics\r\n[http://smartpop.sourceforge.net](http://smartpop.sourceforge.net)\r\n\r\n### CARPnTREES \r\nReconstructing female and male lineages from haplogroups in humans (with Marie Zufferey)\r\n[http://carpntrees.shinyapps.io/shinyapp](http://carpntrees.shinyapps.io/shinyapp)\r\n\r\n## Research Interests\r\nComputational statistics:\r\n* Inference tools using heavy programming machinery\r\n\r\n* Simulation models\r\n\r\n* Bayesian inferences\r\n\r\n* Big data\r\n\r\nBiostatistics:\r\n* Population genetics\r\n\r\n* Social evolution (culture, languages, marriage rules)\r\n\r\n* Genetic evolution\r\n\r\nContact: elsa.guillot@unil.ch\r\n\r\n## Other Interests\r\nSports (Handball, Squash, Running)\r\n\r\nWriting \r\n\r\nOutreach\r\n \r\n[http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html](http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html)\r\n","google":"UA-74875640-1","note":"Don't delete this file! It's used internally to help with page regeneration."} \ No newline at end of file +{ + "name": "Elsa G Guillot", + "tagline": "Computational Biostatistics", + "body": "Following an engineering degree in modeling biological system, a master degree in modeling complex system and a PhD in statistics, my research focuses on the modeling of human systems (culture, languages, societies) using biological dataset.\r\n\r\n## Current Projects\r\n\r\n### Inferring selection from human population genetics\r\nWith Jerome Goudet (UNIL) and Marc Robinson-Réchavi (UNIL)\r\n\r\n### Effect of sampling bias on human population genetics\r\nWith Jerome Goudet (UNIL) and Loic Pillard (UNIL)\r\n\r\n### Effect of marriages rules on population genetics\r\nWith Murray Cox (Massey University) and Steve Lansing (Nanyang Technological University)\r\n\r\n## Publications\r\nGuillot E.G. and Cox MP. High Frequency Haplotypes are Expected Events, not Historical Figures [version 2; referees: 1 approved, 2 approved with reservations] F1000Research 2015, 4:666 (doi: [10.12688/f1000research.7023.2](10.12688/f1000research.7023.2))\r\n\r\nGuillot, E.G., M.L. Hazelton, T.M. Karafet, J.S. Lansing, H. Sudoyo and M.P. Cox. 2015. Relaxed Observance of Traditional Marriage Rules Allows Social Connectivity without Loss of Genetic Diversity. Molecular Biology and Evolution 32:2254-2262 [doi: 10.1093/molbev/msv102](10.1093/molbev/msv102)\r\n\r\nGuillot, E.G. and M.P. Cox. 2014. SMARTPOP: Inferring the Impact of Social Dynamics on Genetic Diversity through High Speed Simulations. BMC Bioinformatics 15:175 doi [10.1186/1471210515175](10.1186/1471210515175)\r\n\r\nGuillot, E.G., M.K. Tumonggor, J.S. Lansing, H. Sudoyo and M.P. Cox. 2013. Climate Change Influenced Female Population Sizes through Time across the Indonesian Archipelago. Human Biology 85:135152 doi :[ 10.3378/027.085.0306](10.3378/027.085.0306)\r\n\r\nMoussaïd, M., E.G. Guillot, M. Moreau, J. Fehrenbach, O. Chabiron, S. Lemercier, J. Pettré, C. AppertRolland, P. Degond and G. Theraulaz. 2012. Traffic Instabilities in self- organized pedestrian crowds. PLoS Computational Biology 8, 3: e100244 doi : [10.1371/journal.pcbi.1002442](10.1371/journal.pcbi.1002442)\r\n\r\n## CV\r\n\r\n### 2015-2016 Post-Doctorat \r\n[Département Écolgie et Évolution](https://www.unil.ch/dee/home.html), Université de Lausanne, Suisse\r\n\r\nWith Prof. [Marc Robinson-Réchavi](http://www.unil.ch/dee/home/menuinst/people/group-leaders/prof-marc-robinson-rechavi.html) and Prof [Jérôme Goudet](http://www.unil.ch/dee/home/menuinst/people/group-leaders/prof-jerome-goudet.html)\r\n\r\n### 2011-2015 PhD in statistics \r\n“Modeling the role of social construct in population genetics”\r\n[Institute of fundamental Sciences](http://ifs.massey.ac.nz/) (IFS), Massey University, Palmerston North, Nouvelle-Zélande (NZ)\r\n\r\nDistinction : Dean's list of exceptionnal thesis\r\n\r\nSupervised by Prof. [Murray P Cox](http://massey.genomicus.com/) and Prof. [Martin L Hazelton](http://www.massey.ac.nz/~mhazelto/)\r\n\r\n### 2010-2011 Master, computer sciences option modeling of complex systems\r\n\r\n[IXXI](http://www.ens-lyon.fr/MasterSDM/en/master-2/m2-complex-systems), École Normale Supérieure (ENS), Lyon, France\r\n\r\n### 2006-2011 Master of Engineering, speciality in bioinformatics and modeling\r\n\r\n[BIM](http://bim.insa-lyon.fr/en), Institut National des Sciences Appliquées (INSA), Lyon, France\r\n\r\n### 2011 Master project\r\n\"Modeling bidirectional flow of pedestrians\"\r\n\r\n[CRCA](http://cognition.ups-tlse.fr/?lang=en), University Paul Sabatier, Toulouse, France\r\n\r\nWith Prof. [Guy Theraulaz](http://cognition.ups-tlse.fr/spip.php?article182&lang=fr)\r\n\r\n\r\n## Software\r\n\r\n### SMARTPOP \r\n\r\nForward in Time simulations of structured population genetics\r\n\r\n[http://smartpop.sourceforge.net](http://smartpop.sourceforge.net)\r\n\r\n### CARPnTREES \r\n\r\nReconstructing female and male lineages from haplogroups in humans (with Marie Zufferey)\r\n\r\n[http://carpntrees.shinyapps.io/shinyapp](http://carpntrees.shinyapps.io/shinyapp)\r\n\r\n## Research Interests\r\n\r\nComputational statistics:\r\n\r\n* Inference tools using heavy programming machinery\r\n\r\n* Simulation models\r\n\r\n* Bayesian inferences\r\n\r\n* Big data\r\n\r\nBiostatistics:\r\n\r\n* Population genetics\r\n\r\n* Social evolution (culture, languages, marriage rules)\r\n\r\n* Genetic evolution\r\n\r\nContact: elsa.guillot@unil.ch\r\n\r\n## Other Interests\r\n\r\nSports (Handball, Squash, Running)\r\n\r\nWriting \r\n\r\nOutreach\r\n \r\n[http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html](http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html)\r\n\r\nTwitter: [@elza_guillot](https://twitter.com/elza_guillot)\r\n", + "google": "UA-74875640-1", + "note": "Don't delete this file! It's used internally to help with page regeneration." +} \ No newline at end of file