From 76cf38207b393305c9c335c7cfd73e896ba745b0 Mon Sep 17 00:00:00 2001
From: Elsa <elza.guillot@gmail.com>
Date: Wed, 9 Mar 2016 14:50:09 +0100
Subject: [PATCH] Replace master branch with page content via GitHub

---
 index.html  | 20 ++++++++++++--------
 params.json |  2 +-
 2 files changed, 13 insertions(+), 9 deletions(-)

diff --git a/index.html b/index.html
index 44300e4..f3518d6 100644
--- a/index.html
+++ b/index.html
@@ -30,7 +30,7 @@
         <h2>
 <a id="publications" class="anchor" href="#publications" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>Publications</h2>
 
-<p>Guillot EG and Cox MP. High Frequency Haplotypes are Expected Events, not Historical Figures  [version 2; referees: 1 approved, 2 approved with reservations] F1000Research 2015, 4:666 (doi: 10.12688/f1000research.7023.2)</p>
+<p>Guillot E.G. and Cox MP. High Frequency Haplotypes are Expected Events, not Historical Figures  [version 2; referees: 1 approved, 2 approved with reservations] F1000Research 2015, 4:666 (doi: 10.12688/f1000research.7023.2)</p>
 
 <p>Guillot, E.G., M.L. Hazelton, T.M. Karafet, J.S. Lansing, H. Sudoyo and M.P. Cox. 2015. Relaxed Observance of Traditional Marriage Rules Allows Social Connectivity without Loss of Genetic Diversity. Molecular Biology and Evolution 32:2254-2262</p>
 
@@ -65,14 +65,16 @@ With Prof. Guy Theraulaz</p></li>
 <a id="softwares" class="anchor" href="#softwares" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>Softwares</h2>
 
 <h3>
-<a id="smartpop--forward-in-time-simulations-of-structured-population-genetics" class="anchor" href="#smartpop--forward-in-time-simulations-of-structured-population-genetics" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>SMARTPOP : Forward in Time simulations of structured population genetics</h3>
+<a id="smartpop" class="anchor" href="#smartpop" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>SMARTPOP</h3>
 
-<p><a href="smartpop.sourceforge.net">smartpop.sourceforge.net</a></p>
+<p>Forward in Time simulations of structured population genetics
+<a href="smartpop.sourceforge.net">smartpop.sourceforge.net</a></p>
 
 <h3>
-<a id="carpntrees--reconstructing-female-and-male-lineages-from-haplogroups-in-humans-with-marie-zufferey" class="anchor" href="#carpntrees--reconstructing-female-and-male-lineages-from-haplogroups-in-humans-with-marie-zufferey" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>CARPnTREES : Reconstructing female and male lineages from haplogroups in humans (with Marie Zufferey)</h3>
+<a id="carpntrees" class="anchor" href="#carpntrees" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>CARPnTREES</h3>
 
-<p><a href="carpntrees.shinyapps.io/shinyapp">carpntrees.shinyapps.io/shinyapp</a></p>
+<p>Reconstructing female and male lineages from haplogroups in humans (with Marie Zufferey)
+<a href="carpntrees.shinyapps.io/shinyapp">carpntrees.shinyapps.io/shinyapp</a></p>
 
 <h2>
 <a id="research-interests" class="anchor" href="#research-interests" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>Research Interests</h2>
@@ -99,9 +101,11 @@ With Prof. Guy Theraulaz</p></li>
 <h2>
 <a id="other-interests" class="anchor" href="#other-interests" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>Other Interests</h2>
 
-<p>Sports (Handball, Squash, Running)
-Writing 
-Outreach</p>
+<p>Sports (Handball, Squash, Running)</p>
+
+<p>Writing </p>
+
+<p>Outreach</p>
 
 <p><a href="http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html">http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html</a></p>
       </section>
diff --git a/params.json b/params.json
index b28c9aa..c338d35 100644
--- a/params.json
+++ b/params.json
@@ -1 +1 @@
-{"name":"Elsa G Guillot","tagline":"Computational Biostatistics","body":"\r\n\r\n## Publications\r\nGuillot EG and Cox MP. High Frequency Haplotypes are Expected Events, not Historical Figures  [version 2; referees: 1 approved, 2 approved with reservations] F1000Research 2015, 4:666 (doi: 10.12688/f1000research.7023.2)\r\n\r\nGuillot, E.G., M.L. Hazelton, T.M. Karafet, J.S. Lansing, H. Sudoyo and M.P. Cox. 2015. Relaxed Observance of Traditional Marriage Rules Allows Social Connectivity without Loss of Genetic Diversity. Molecular Biology and Evolution 32:2254-2262\r\n\r\nGuillot, E.G. and M.P. Cox. 2014. SMARTPOP: Inferring the Impact of Social Dynamics on Genetic Diversity through High Speed Simulations. BMC Bioinformatics 15:175 doi 10.1186/1471210515175\r\n\r\nGuillot, E.G., M.K. Tumonggor, J.S. Lansing, H. Sudoyo and M.P. Cox. 2013. Climate Change Influenced Female Population Sizes through Time across the Indonesian Archipelago. Human Biology 85:135152 doi : 10.3378/027.085.0306\r\nMoussaïd, M., E.G. Guillot, M. Moreau, J. Fehrenbach, O. Chabiron, S. Lemercier, J. Pettré, C. AppertRolland, P. Degond and G. Theraulaz. 2012. Traffic Instabilities in self- organized pedestrian crowds. PLoS Computational Biology 8, 3: e100244 doi : 10.1371/journal.pcbi.1002442\r\n\r\n## CV\r\n\r\n* 2015-2016 Post-Doctorat \r\nDépartement Écologie Évolution, Université de Lausanne, Suisse\r\nWith Prof. Marc Robinson-Rechavi and Prof Jérôme Goudet\r\n\r\n* 2011-2015 PhD in statistics \r\n“Modeling the role of social construct in population genetics”\r\nInstitut des sciences fondamentales (IFS), Massey University, Palmerston North, Nouvelle-Zélande (NZ)\r\nDistinction : Dean's list of exceptionnal thesis\r\nSupervised by Prof. Murray P Cox and Prof. Martin L Hazelton\r\n\r\n* 2010-2011 Master, computer sciences option modeling of complex systems\r\nÉcole Normale Supérieure (ENS), Lyon, France\r\n\r\n* 2006-2011 Master of Engineering, speciality in bioinformatics and modeling\r\nInstitut National des Sciences Appliquées (INSA), Lyon, France\r\n\r\n* 2011 Master project\r\n\"Modeling bidirectional flow of pedestrians\"\r\nCRCA, University Paul Sabatier, Toulouse, France\r\nWith Prof. Guy Theraulaz\r\n\r\n\r\n## Softwares\r\n\r\n### SMARTPOP : Forward in Time simulations of structured population genetics\r\n[smartpop.sourceforge.net](smartpop.sourceforge.net)\r\n\r\n### CARPnTREES : Reconstructing female and male lineages from haplogroups in humans (with Marie Zufferey)\r\n[carpntrees.shinyapps.io/shinyapp](carpntrees.shinyapps.io/shinyapp)\r\n\r\n## Research Interests\r\nComputational statistics:\r\n* Inference tools using heavy programming machinery\r\n\r\n* Simulation models\r\n\r\n* Bayesian inferences\r\n\r\n* Big data\r\n\r\nBiostatistics:\r\n* Population genetics\r\n\r\n* Social evolution (culture, languages, marriage rules)\r\n\r\n* Genetic evolution\r\n\r\nContact: elsa.guillot@unil.ch\r\n\r\n## Other Interests\r\nSports (Handball, Squash, Running)\r\nWriting \r\nOutreach\r\n \r\n\r\nhttp://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html\r\n","google":"","note":"Don't delete this file! It's used internally to help with page regeneration."}
\ No newline at end of file
+{"name":"Elsa G Guillot","tagline":"Computational Biostatistics","body":"\r\n\r\n## Publications\r\nGuillot E.G. and Cox MP. High Frequency Haplotypes are Expected Events, not Historical Figures  [version 2; referees: 1 approved, 2 approved with reservations] F1000Research 2015, 4:666 (doi: 10.12688/f1000research.7023.2)\r\n\r\nGuillot, E.G., M.L. Hazelton, T.M. Karafet, J.S. Lansing, H. Sudoyo and M.P. Cox. 2015. Relaxed Observance of Traditional Marriage Rules Allows Social Connectivity without Loss of Genetic Diversity. Molecular Biology and Evolution 32:2254-2262\r\n\r\nGuillot, E.G. and M.P. Cox. 2014. SMARTPOP: Inferring the Impact of Social Dynamics on Genetic Diversity through High Speed Simulations. BMC Bioinformatics 15:175 doi 10.1186/1471210515175\r\n\r\nGuillot, E.G., M.K. Tumonggor, J.S. Lansing, H. Sudoyo and M.P. Cox. 2013. Climate Change Influenced Female Population Sizes through Time across the Indonesian Archipelago. Human Biology 85:135152 doi : 10.3378/027.085.0306\r\nMoussaïd, M., E.G. Guillot, M. Moreau, J. Fehrenbach, O. Chabiron, S. Lemercier, J. Pettré, C. AppertRolland, P. Degond and G. Theraulaz. 2012. Traffic Instabilities in self- organized pedestrian crowds. PLoS Computational Biology 8, 3: e100244 doi : 10.1371/journal.pcbi.1002442\r\n\r\n## CV\r\n\r\n* 2015-2016 Post-Doctorat \r\nDépartement Écologie Évolution, Université de Lausanne, Suisse\r\nWith Prof. Marc Robinson-Rechavi and Prof Jérôme Goudet\r\n\r\n* 2011-2015 PhD in statistics \r\n“Modeling the role of social construct in population genetics”\r\nInstitut des sciences fondamentales (IFS), Massey University, Palmerston North, Nouvelle-Zélande (NZ)\r\nDistinction : Dean's list of exceptionnal thesis\r\nSupervised by Prof. Murray P Cox and Prof. Martin L Hazelton\r\n\r\n* 2010-2011 Master, computer sciences option modeling of complex systems\r\nÉcole Normale Supérieure (ENS), Lyon, France\r\n\r\n* 2006-2011 Master of Engineering, speciality in bioinformatics and modeling\r\nInstitut National des Sciences Appliquées (INSA), Lyon, France\r\n\r\n* 2011 Master project\r\n\"Modeling bidirectional flow of pedestrians\"\r\nCRCA, University Paul Sabatier, Toulouse, France\r\nWith Prof. Guy Theraulaz\r\n\r\n\r\n## Softwares\r\n\r\n### SMARTPOP \r\nForward in Time simulations of structured population genetics\r\n[smartpop.sourceforge.net](smartpop.sourceforge.net)\r\n\r\n### CARPnTREES \r\nReconstructing female and male lineages from haplogroups in humans (with Marie Zufferey)\r\n[carpntrees.shinyapps.io/shinyapp](carpntrees.shinyapps.io/shinyapp)\r\n\r\n## Research Interests\r\nComputational statistics:\r\n* Inference tools using heavy programming machinery\r\n\r\n* Simulation models\r\n\r\n* Bayesian inferences\r\n\r\n* Big data\r\n\r\nBiostatistics:\r\n* Population genetics\r\n\r\n* Social evolution (culture, languages, marriage rules)\r\n\r\n* Genetic evolution\r\n\r\nContact: elsa.guillot@unil.ch\r\n\r\n## Other Interests\r\nSports (Handball, Squash, Running)\r\n\r\nWriting \r\n\r\nOutreach\r\n \r\n\r\nhttp://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html\r\n","google":"","note":"Don't delete this file! It's used internally to help with page regeneration."}
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-- 
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