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 <h2>
 <a id="publications" class="anchor" href="#publications" aria-hidden="true"><span aria-hidden="true" class="octicon octicon-link"></span></a>Publications</h2>
 
+<p>Guillot E.G. Modeling the role of social structure in population genetics. PhD Thesis at Massey university <a href="http://mro.massey.ac.nz/bitstream/handle/10179/6951/02_whole.pdf?sequence=2&amp;isAllowed=y">pdf here</a></p>
+
 <p>Guillot E.G. and Cox MP. High Frequency Haplotypes are Expected Events, not Historical Figures  [version 2; referees: 1 approved, 2 approved with reservations] F1000Research 2015, 4:666 doi:<a href="http://dx.doi.org/10.12688/f1000research.7023.2">10.12688/f1000research.7023.2</a></p>
 
 <p>Guillot, E.G., M.L. Hazelton, T.M. Karafet, J.S. Lansing, H. Sudoyo and M.P. Cox. 2015. Relaxed Observance of Traditional Marriage Rules Allows Social Connectivity without Loss of Genetic Diversity. Molecular Biology and Evolution 32:2254-2262 <a href="http://dx.doi.org/10.1093/molbev/msv102">doi: 10.1093/molbev/msv102</a></p>
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 {
   "name": "Elsa G Guillot",
   "tagline": "Computational Biostatistics",
-  "body": "Following an engineering degree in modeling biological system, a master degree in modeling complex system and a PhD in statistics, my research focuses on the modeling of human systems (culture, languages, societies) using biological dataset.\r\n\r\n## Current Projects\r\n\r\n### Inferring selection from human population genetics\r\nWith Jerome Goudet (UNIL) and Marc Robinson-Réchavi (UNIL)\r\n\r\n### Effect of sampling bias on human population genetics\r\nWith Jerome Goudet (UNIL) and Loic Pillard (UNIL)\r\n\r\n### Effect of marriages rules on population genetics\r\nWith Murray Cox (Massey University) and Steve Lansing (Nanyang Technological University)\r\n\r\n## Publications\r\nGuillot E.G. and Cox MP. High Frequency Haplotypes are Expected Events, not Historical Figures  [version 2; referees: 1 approved, 2 approved with reservations] F1000Research 2015, 4:666 doi:[10.12688/f1000research.7023.2](http://dx.doi.org/10.12688/f1000research.7023.2)\r\n\r\nGuillot, E.G., M.L. Hazelton, T.M. Karafet, J.S. Lansing, H. Sudoyo and M.P. Cox. 2015. Relaxed Observance of Traditional Marriage Rules Allows Social Connectivity without Loss of Genetic Diversity. Molecular Biology and Evolution 32:2254-2262 [doi: 10.1093/molbev/msv102](http://dx.doi.org/10.1093/molbev/msv102)\r\n\r\nGuillot, E.G. and M.P. Cox. 2014. SMARTPOP: Inferring the Impact of Social Dynamics on Genetic Diversity through High Speed Simulations. BMC Bioinformatics 15:175 doi [10.1186/1471210515175](http://dx.doi.org/10.1186/1471210515175)\r\n\r\nGuillot, E.G., M.K. Tumonggor, J.S. Lansing, H. Sudoyo and M.P. Cox. 2013. Climate Change Influenced Female Population Sizes through Time across the Indonesian Archipelago. Human Biology 85:135152 doi :[ 10.3378/027.085.0306](http://dx.doi.org/10.3378/027.085.0306)\r\n\r\nMoussaïd, M., E.G. Guillot, M. Moreau, J. Fehrenbach, O. Chabiron, S. Lemercier, J. Pettré, C. AppertRolland, P. Degond and G. Theraulaz. 2012. Traffic Instabilities in self- organized pedestrian crowds. PLoS Computational Biology 8, 3: e100244 doi : [10.1371/journal.pcbi.1002442](http://dx.doi.org/10.1371/journal.pcbi.1002442)\r\n\r\n## CV\r\n\r\n### 2015-2016 Post-Doctorat \r\n[Département Écolgie et Évolution](https://www.unil.ch/dee/home.html), Université de Lausanne, Suisse\r\n\r\nWith Prof. [Marc Robinson-Réchavi](http://www.unil.ch/dee/home/menuinst/people/group-leaders/prof-marc-robinson-rechavi.html) and Prof [Jérôme Goudet](http://www.unil.ch/dee/home/menuinst/people/group-leaders/prof-jerome-goudet.html)\r\n\r\n### 2011-2015 PhD in statistics \r\n“Modeling the role of social construct in population genetics”\r\n[Institute of fundamental Sciences](http://ifs.massey.ac.nz/) (IFS), Massey University, Palmerston North, Nouvelle-Zélande (NZ)\r\n\r\nDistinction : Dean's list of exceptionnal thesis\r\n\r\nSupervised by Prof. [Murray P Cox](http://massey.genomicus.com/) and Prof. [Martin L Hazelton](http://www.massey.ac.nz/~mhazelto/)\r\n\r\n### 2010-2011 Master, computer sciences option modeling of complex systems\r\n\r\n[IXXI](http://www.ens-lyon.fr/MasterSDM/en/master-2/m2-complex-systems), École Normale Supérieure (ENS), Lyon, France\r\n\r\n### 2006-2011 Master of Engineering, speciality in bioinformatics and modeling\r\n\r\n[BIM](http://bim.insa-lyon.fr/en), Institut National des Sciences Appliquées (INSA), Lyon, France\r\n\r\n### 2011 Master project\r\n\"Modeling bidirectional flow of pedestrians\"\r\n\r\n[CRCA](http://cognition.ups-tlse.fr/?lang=en), University Paul Sabatier, Toulouse, France\r\n\r\nWith Prof. [Guy Theraulaz](http://cognition.ups-tlse.fr/spip.php?article182&lang=fr)\r\n\r\n\r\n## Software\r\n\r\n### SMARTPOP \r\n\r\nForward in Time simulations of structured population genetics\r\n\r\n[http://smartpop.sourceforge.net](http://smartpop.sourceforge.net)\r\n\r\n### CARPnTREES \r\n\r\nReconstructing female and male lineages from haplogroups in humans (with Marie Zufferey)\r\n\r\n[http://carpntrees.shinyapps.io/shinyapp](http://carpntrees.shinyapps.io/shinyapp)\r\n\r\n## Research Interests\r\n\r\nComputational statistics:\r\n\r\n* Inference tools using heavy programming machinery\r\n\r\n* Simulation models\r\n\r\n* Bayesian inferences\r\n\r\n* Big data\r\n\r\nBiostatistics:\r\n\r\n* Population genetics\r\n\r\n* Social evolution (culture, languages, marriage rules)\r\n\r\n* Genetic evolution\r\n\r\nContact: elsa.guillot@unil.ch\r\n\r\n## Other Interests\r\n\r\nSports (Handball, Squash, Running)\r\n\r\nWriting \r\n\r\nOutreach\r\n \r\n[http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html](http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html)\r\n\r\nTwitter: [@elza_guillot](https://twitter.com/elza_guillot)\r\n",
+  "body": "Following an engineering degree in modeling biological system, a master degree in modeling complex system and a PhD in statistics, my research focuses on the modeling of human systems (culture, languages, societies) using biological dataset.\r\n\r\n## Current Projects\r\n\r\n### Inferring selection from human population genetics\r\nWith Jerome Goudet (UNIL) and Marc Robinson-Réchavi (UNIL)\r\n\r\n### Effect of sampling bias on human population genetics\r\nWith Jerome Goudet (UNIL) and Loic Pillard (UNIL)\r\n\r\n### Effect of marriages rules on population genetics\r\nWith Murray Cox (Massey University) and Steve Lansing (Nanyang Technological University)\r\n\r\n## Publications\r\n\r\nGuillot E.G. Modeling the role of social structure in population genetics. PhD Thesis at Massey university [pdf here](http://mro.massey.ac.nz/bitstream/handle/10179/6951/02_whole.pdf?sequence=2&isAllowed=y)\r\n\r\nGuillot E.G. and Cox MP. High Frequency Haplotypes are Expected Events, not Historical Figures  [version 2; referees: 1 approved, 2 approved with reservations] F1000Research 2015, 4:666 doi:[10.12688/f1000research.7023.2](http://dx.doi.org/10.12688/f1000research.7023.2)\r\n\r\nGuillot, E.G., M.L. Hazelton, T.M. Karafet, J.S. Lansing, H. Sudoyo and M.P. Cox. 2015. Relaxed Observance of Traditional Marriage Rules Allows Social Connectivity without Loss of Genetic Diversity. Molecular Biology and Evolution 32:2254-2262 [doi: 10.1093/molbev/msv102](http://dx.doi.org/10.1093/molbev/msv102)\r\n\r\nGuillot, E.G. and M.P. Cox. 2014. SMARTPOP: Inferring the Impact of Social Dynamics on Genetic Diversity through High Speed Simulations. BMC Bioinformatics 15:175 doi [10.1186/1471210515175](http://dx.doi.org/10.1186/1471210515175)\r\n\r\nGuillot, E.G., M.K. Tumonggor, J.S. Lansing, H. Sudoyo and M.P. Cox. 2013. Climate Change Influenced Female Population Sizes through Time across the Indonesian Archipelago. Human Biology 85:135152 doi :[ 10.3378/027.085.0306](http://dx.doi.org/10.3378/027.085.0306)\r\n\r\nMoussaïd, M., E.G. Guillot, M. Moreau, J. Fehrenbach, O. Chabiron, S. Lemercier, J. Pettré, C. AppertRolland, P. Degond and G. Theraulaz. 2012. Traffic Instabilities in self- organized pedestrian crowds. PLoS Computational Biology 8, 3: e100244 doi : [10.1371/journal.pcbi.1002442](http://dx.doi.org/10.1371/journal.pcbi.1002442)\r\n\r\n## CV\r\n\r\n### 2015-2016 Post-Doctorat \r\n[Département Écolgie et Évolution](https://www.unil.ch/dee/home.html), Université de Lausanne, Suisse\r\n\r\nWith Prof. [Marc Robinson-Réchavi](http://www.unil.ch/dee/home/menuinst/people/group-leaders/prof-marc-robinson-rechavi.html) and Prof [Jérôme Goudet](http://www.unil.ch/dee/home/menuinst/people/group-leaders/prof-jerome-goudet.html)\r\n\r\n### 2011-2015 PhD in statistics \r\n“Modeling the role of social construct in population genetics”\r\n[Institute of fundamental Sciences](http://ifs.massey.ac.nz/) (IFS), Massey University, Palmerston North, Nouvelle-Zélande (NZ)\r\n\r\nDistinction : Dean's list of exceptionnal thesis\r\n\r\nSupervised by Prof. [Murray P Cox](http://massey.genomicus.com/) and Prof. [Martin L Hazelton](http://www.massey.ac.nz/~mhazelto/)\r\n\r\n### 2010-2011 Master, computer sciences option modeling of complex systems\r\n\r\n[IXXI](http://www.ens-lyon.fr/MasterSDM/en/master-2/m2-complex-systems), École Normale Supérieure (ENS), Lyon, France\r\n\r\n### 2006-2011 Master of Engineering, speciality in bioinformatics and modeling\r\n\r\n[BIM](http://bim.insa-lyon.fr/en), Institut National des Sciences Appliquées (INSA), Lyon, France\r\n\r\n### 2011 Master project\r\n\"Modeling bidirectional flow of pedestrians\"\r\n\r\n[CRCA](http://cognition.ups-tlse.fr/?lang=en), University Paul Sabatier, Toulouse, France\r\n\r\nWith Prof. [Guy Theraulaz](http://cognition.ups-tlse.fr/spip.php?article182&lang=fr)\r\n\r\n\r\n## Software\r\n\r\n### SMARTPOP \r\n\r\nForward in Time simulations of structured population genetics\r\n\r\n[http://smartpop.sourceforge.net](http://smartpop.sourceforge.net)\r\n\r\n### CARPnTREES \r\n\r\nReconstructing female and male lineages from haplogroups in humans (with Marie Zufferey)\r\n\r\n[http://carpntrees.shinyapps.io/shinyapp](http://carpntrees.shinyapps.io/shinyapp)\r\n\r\n## Research Interests\r\n\r\nComputational statistics:\r\n\r\n* Inference tools using heavy programming machinery\r\n\r\n* Simulation models\r\n\r\n* Bayesian inferences\r\n\r\n* Big data\r\n\r\nBiostatistics:\r\n\r\n* Population genetics\r\n\r\n* Social evolution (culture, languages, marriage rules)\r\n\r\n* Genetic evolution\r\n\r\nContact: elsa.guillot@unil.ch\r\n\r\n## Other Interests\r\n\r\nSports (Handball, Squash, Running)\r\n\r\nWriting \r\n\r\nOutreach\r\n \r\n[http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html](http://www.unil.ch/dee/en/home/menuinst/people/post-docs--associates/dr-elsa-guillot.html)\r\n\r\nTwitter: [@elza_guillot](https://twitter.com/elza_guillot)\r\n",
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